Solving the problem of comparing whole bacterial genomes across different sequencing platforms.

by Rolf S Kaas, Pimlapas Leekitcharoenphon, Frank M Aarestrup, Ole Lund
Published 2014

Metagenomics analysis of bacteriophages and antimicrobial resistance from global urban sewage

by Josephine E. S. Strange, Pimlapas Leekitcharoenphon, Frederik Duus Møller, Frank M. Aarestrup
Published 2021

Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica.

by Pimlapas Leekitcharoenphon, Eva M Nielsen, Rolf S Kaas, Ole Lund, Frank M Aarestrup
Published 2014

A Peek into the Plasmidome of Global Sewage

by Philipp Kirstahler, Frederik Teudt, Saria Otani, Frank M. Aarestrup, Sünje Johanna Pamp
Published 2021

The role of the st313-td gene in virulence of Salmonella Typhimurium ST313.

by Ana Herrero-Fresno, Inke Wallrodt, Pimlapas Leekitcharoenphon, John Elmerdahl Olsen, Frank M Aarestrup, Rene S Hendriksen
Published 2014

Is the Evolution of <named-content content-type="genus-species">Salmonella enterica</named-content> subsp. <italic toggle="yes">enterica</italic> Linked to Restriction-Modification...

by Louise Roer, Rene S. Hendriksen, Pimlapas Leekitcharoenphon, Oksana Lukjancenko, Rolf Sommer Kaas, Henrik Hasman, Frank M. Aarestrup
Published 2016

Long-Term Temporal Stability of the Resistome in Sewage from Copenhagen

by Christian Brinch, Pimlapas Leekitcharoenphon, Ana S. R. Duarte, Christina A. Svendsen, Jacob D. Jensen, Frank M. Aarestrup
Published 2020

Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition

by Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp
Published 2016

Reply to “South Asia Instead of Nepal May Be the Origin of the Haitian Cholera Outbreak Strain”

by Paul S. Keim, Frank M. Aarestrup, Geeta Shakya, Lance B. Price, Rene S. Hendriksen, David M. Engelthaler, Talima Pearson
Published 2011

Drivers and Dynamics of Methicillin-Resistant Livestock-Associated <named-content content-type="genus-species">Staphylococcus aureus</named-content> CC398 in Pigs and Humans in Den...

by Raphael N. Sieber, Robert L. Skov, Jens Nielsen, Jana Schulz, Lance B. Price, Frank M. Aarestrup, Anders R. Larsen, Marc Stegger, Jesper Larsen
Published 2018

Author Correction: Setting a baseline for global urban virome surveillance in sewage

by David F. Nieuwenhuijse, Bas B. Oude Munnink, My V. T. Phan, the Global Sewage Surveillance project consortium, Patrick Munk, Shweta Venkatakrishnan, Frank M. Aarestrup, Matthew Cotten, Marion P. G. Koopmans
Published 2021

Livestock Origin for a Human Pandemic Clone of Community-Associated Methicillin-Resistant <named-content content-type="genus-species">Staphylococcus aureus</named-content>

by Laura E. Spoor, Paul R. McAdam, Lucy A. Weinert, Andrew Rambaut, Henrik Hasman, Frank M. Aarestrup, Angela M. Kearns, Anders R. Larsen, Robert L. Skov, J. Ross Fitzgerald
Published 2013

Population Genetics of <named-content content-type="genus-species">Vibrio cholerae</named-content> from Nepal in 2010: Evidence on the Origin of the Haitian Outbreak

by Rene S. Hendriksen, Lance B. Price, James M. Schupp, John D. Gillece, Rolf S. Kaas, David M. Engelthaler, Valeria Bortolaia, Talima Pearson, Andrew E. Waters, Bishnu Prasad Upadhyay, Sirjana Devi Shrestha, Shailaja Adhikari, Geeta Shakya, Paul S. Keim, Frank M. Aarestrup
Published 2011

Genomic evolution of antimicrobial resistance in Escherichia coli

by Pimlapas Leekitcharoenphon, Markus Hans Kristofer Johansson, Patrick Munk, Burkhard Malorny, Magdalena Skarżyńska, Katharina Wadepohl, Gabriel Moyano, Ayla Hesp, Kees T. Veldman, Alex Bossers, EFFORT Consortium, Magdalena Zając, Dariusz Wasyl, Pascal Sanders, Bruno Gonzalez-Zorn, Michael S. M. Brouwer, Jaap A. Wagenaar, Dick J. J. Heederik, Dik Mevius, Frank M. Aarestrup
Published 2021

<named-content content-type="genus-species">Staphylococcus aureus</named-content> CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock

by Lance B. Price, Marc Stegger, Henrik Hasman, Maliha Aziz, Jesper Larsen, Paal Skytt Andersen, Talima Pearson, Andrew E. Waters, Jeffrey T. Foster, James Schupp, John Gillece, Elizabeth Driebe, Cindy M. Liu, Burkhard Springer, Irena Zdovc, Antonio Battisti, Alessia Franco, Jacek Żmudzki, Stefan Schwarz, Patrick Butaye, Eric Jouy, Constanca Pomba, M. Concepción Porrero, Raymond Ruimy, Tara C. Smith, D. Ashley Robinson, J. Scott Weese, Carmen Sofia Arriola, Fangyou Yu, Frederic Laurent, Paul Keim, Robert Skov, Frank M. Aarestrup
Published 2013

<named-content content-type="genus-species">Staphylococcus aureus</named-content> CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock

by Lance B. Price, Marc Stegger, Henrik Hasman, Maliha Aziz, Jesper Larsen, Paal Skytt Andersen, Talima Pearson, Andrew E. Waters, Jeffrey T. Foster, James Schupp, John Gillece, Elizabeth Driebe, Cindy M. Liu, Burkhard Springer, Irena Zdovc, Antonio Battisti, Alessia Franco, Jacek Żmudzki, Stefan Schwarz, Patrick Butaye, Eric Jouy, Constanca Pomba, M. Concepción Porrero, Raymond Ruimy, Tara C. Smith, D. Ashley Robinson, J. Scott Weese, Carmen Sofia Arriola, Fangyou Yu, Frederic Laurent, Paul Keim, Robert Skov, Frank M. Aarestrup
Published 2012

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

by Rene S. Hendriksen, Patrick Munk, Patrick Njage, Bram van Bunnik, Luke McNally, Oksana Lukjancenko, Timo Röder, David Nieuwenhuijse, Susanne Karlsmose Pedersen, Jette Kjeldgaard, Rolf S. Kaas, Philip Thomas Lanken Conradsen Clausen, Josef Korbinian Vogt, Pimlapas Leekitcharoenphon, Milou G. M. van de Schans, Tina Zuidema, Ana Maria de Roda Husman, Simon Rasmussen, Bent Petersen, The Global Sewage Surveillance project consortium, Clara Amid, Guy Cochrane, Thomas Sicheritz-Ponten, Heike Schmitt, Jorge Raul Matheu Alvarez, Awa Aidara-Kane, Sünje J. Pamp, Ole Lund, Tine Hald, Mark Woolhouse, Marion P. Koopmans, Håkan Vigre, Thomas Nordahl Petersen, Frank M. Aarestrup
Published 2019