VEGA is an interpretable generative model for inferring biological network activity in single-cell transcriptomics

par Lucas Seninge, Ioannis Anastopoulos, Hongxu Ding, Joshua Stuart
Publié 2021

Biological process activity transformation of single cell gene expression for cross-species alignment

par Hongxu Ding, Andrew Blair, Ying Yang, Joshua M. Stuart
Publié 2019

Towards inferring nanopore sequencing ionic currents from nucleotide chemical structures

par Hongxu Ding, Ioannis Anastopoulos, Andrew D. Bailey, Joshua Stuart, Benedict Paten
Publié 2021

Quantitative assessment of protein activity in orphan tissues and single cells using the metaVIPER algorithm

par Hongxu Ding, Eugene F. Douglass, Adam M. Sonabend, Angeliki Mela, Sayantan Bose, Christian Gonzalez, Peter D. Canoll, Peter A. Sims, Mariano J. Alvarez, Andrea Califano
Publié 2018