Earth Microbiome Project and Global Systems Biology

par Jack A. Gilbert, Janet K. Jansson, Rob Knight
Publié 2018

Microbiome Aggregated Traits and Assembly Are More Sensitive to Soil Management than Diversity

par Andrew L. Neal, David Hughes, Ian M. Clark, Janet K. Jansson, Penny R. Hirsch
Publié 2021

Deconstructing the Soil Microbiome into Reduced-Complexity Functional Modules

par Dan Naylor, Sarah Fansler, Colin Brislawn, William C. Nelson, Kirsten S. Hofmockel, Janet K. Jansson, Ryan McClure
Publié 2020

Visualizing Microbial Community Dynamics via a Controllable Soil Environment

par Arunima Bhattacharjee, Dusan Velickovic, Thomas W. Wietsma, Sheryl L. Bell, Janet K. Jansson, Kirsten S. Hofmockel, Christopher R. Anderton
Publié 2020

Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation

par Cecilia Noecker, Alexander Eng, Sujatha Srinivasan, Casey M. Theriot, Vincent B. Young, Janet K. Jansson, David N. Fredricks, Elhanan Borenstein
Publié 2016

Landscape topography structures the soil microbiome in arctic polygonal tundra

par Neslihan Taş, Emmanuel Prestat, Shi Wang, Yuxin Wu, Craig Ulrich, Timothy Kneafsey, Susannah G. Tringe, Margaret S. Torn, Susan S. Hubbard, Janet K. Jansson
Publié 2018

Moisture modulates soil reservoirs of active DNA and RNA viruses

par Ruonan Wu, Michelle R. Davison, Yuqian Gao, Carrie D. Nicora, Jason E. Mcdermott, Kristin E. Burnum-Johnson, Kirsten S. Hofmockel, Janet K. Jansson
Publié 2021

Utilizing machine learning to improve clinical trial design for acute respiratory distress syndrome

par E. Schwager, K. Jansson, A. Rahman, S. Schiffer, Y. Chang, G. Boverman, B. Gross, M. Xu-Wilson, P. Boehme, H. Truebel, J. J. Frassica
Publié 2021

Metabolic Interactions between <italic toggle="yes">Brachypodium</italic> and <named-content content-type="genus-species">Pseudomonas fluorescens</named-content> under Controlled I...

par Rene M. Boiteau, Lye Meng Markillie, David W. Hoyt, Dehong Hu, Rosalie K. Chu, Hugh D. Mitchell, Ljiljana Pasa-Tolic, Janet K. Jansson, Christer Jansson
Publié 2021

Selection, Succession, and Stabilization of Soil Microbial Consortia

par Elias K. Zegeye, Colin J. Brislawn, Yuliya Farris, Sarah J. Fansler, Kirsten S. Hofmockel, Janet K. Jansson, Aaron T. Wright, Emily B. Graham, Dan Naylor, Ryan S. McClure, Hans C. Bernstein
Publié 2019

Moleculo Long-Read Sequencing Facilitates Assembly and Genomic Binning from Complex Soil Metagenomes

par Richard Allen White, Eric M. Bottos, Taniya Roy Chowdhury, Jeremy D. Zucker, Colin J. Brislawn, Carrie D. Nicora, Sarah J. Fansler, Kurt R. Glaesemann, Kevin Glass, Janet K. Jansson
Publié 2016

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

par William Walters, Embriette R. Hyde, Donna Berg-Lyons, Gail Ackermann, Greg Humphrey, Alma Parada, Jack A. Gilbert, Janet K. Jansson, J. Gregory Caporaso, Jed A. Fuhrman, Amy Apprill, Rob Knight
Publié 2016

Early-Career Scientists Shaping the World

par Ileana M. Cristea, Pieter C. Dorrestein, Jonathan A. Eisen, Jack A. Gilbert, Julie A. Huber, Janet K. Jansson, Rob Knight, Katherine S. Pollard, Jeroen Raes, Pamela A. Silver, Nicole S. Webster, Jian Xu
Publié 2019

Strategies for metagenomic-guided whole-community proteomics of complex microbial environments.

par Brandi L Cantarel, Alison R Erickson, Nathan C VerBerkmoes, Brian K Erickson, Patricia A Carey, Chongle Pan, Manesh Shah, Emmanuel F Mongodin, Janet K Jansson, Claire M Fraser-Liggett, Robert L Hettich
Publié 2011

Indirect Interspecies Regulation: Transcriptional and Physiological Responses of a Cyanobacterium to Heterotrophic Partnership

par Hans C. Bernstein, Ryan S. McClure, Vera Thiel, Natalie C. Sadler, Young-Mo Kim, William B. Chrisler, Eric A. Hill, Donald A. Bryant, Margaret F. Romine, Janet K. Jansson, Jim K. Fredrickson, Alexander S. Beliaev
Publié 2017

Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease.

par Alison R Erickson, Brandi L Cantarel, Regina Lamendella, Youssef Darzi, Emmanuel F Mongodin, Chongle Pan, Manesh Shah, Jonas Halfvarson, Curt Tysk, Bernard Henrissat, Jeroen Raes, Nathan C Verberkmoes, Claire M Fraser, Robert L Hettich, Janet K Jansson
Publié 2012

Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome

par Tanja V. Maier, Marianna Lucio, Lang Ho Lee, Nathan C. VerBerkmoes, Colin J. Brislawn, Jörg Bernhardt, Regina Lamendella, Jason E. McDermott, Nathalie Bergeron, Silke S. Heinzmann, James T. Morton, Antonio González, Gail Ackermann, Rob Knight, Katharina Riedel, Ronald M. Krauss, Philippe Schmitt-Kopplin, Janet K. Jansson
Publié 2017

MetFish: a Metabolomics Pipeline for Studying Microbial Communities in Chemically Extreme Environments

par Chengdong Xu, Sneha P. Couvillion, Ryan L. Sontag, Nancy G. Isern, Yukari Maezato, Stephen R. Lindemann, Taniya Roy Chowdhury, Rui Zhao, Beau R. Morton, Rosalie K. Chu, Ronald J. Moore, Janet K. Jansson, Vanessa L. Bailey, Paula J. Mouser, Margaret F. Romine, James F. Fredrickson, Thomas O. Metz
Publié 2021

Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations

par Taniya Roy Chowdhury, Joon-Yong Lee, Eric M. Bottos, Colin J. Brislawn, Richard Allen White, Lisa M. Bramer, Joseph Brown, Jeremy D. Zucker, Young-Mo Kim, Ari Jumpponen, Charles W. Rice, Sarah J. Fansler, Thomas O. Metz, Lee Ann McCue, Stephen J. Callister, Hyun-Seob Song, Janet K. Jansson
Publié 2019

Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains.

par Nikos C Kyrpides, Philip Hugenholtz, Jonathan A Eisen, Tanja Woyke, Markus Göker, Charles T Parker, Rudolf Amann, Brian J Beck, Patrick S G Chain, Jongsik Chun, Rita R Colwell, Antoine Danchin, Peter Dawyndt, Tom Dedeurwaerdere, Edward F DeLong, John C Detter, Paul De Vos, Timothy J Donohue, Xiu-Zhu Dong, Dusko S Ehrlich, Claire Fraser, Richard Gibbs, Jack Gilbert, Paul Gilna, Frank Oliver Glöckner, Janet K Jansson, Jay D Keasling, Rob Knight, David Labeda, Alla Lapidus, Jung-Sook Lee, Wen-Jun Li, Juncai Ma, Victor Markowitz, Edward R B Moore, Mark Morrison, Folker Meyer, Karen E Nelson, Moriya Ohkuma, Christos A Ouzounis, Norman Pace, Julian Parkhill, Nan Qin, Ramon Rossello-Mora, Johannes Sikorski, David Smith, Mitch Sogin, Rick Stevens, Uli Stingl, Ken-Ichiro Suzuki, Dorothea Taylor, Jim M Tiedje, Brian Tindall, Michael Wagner, George Weinstock, Jean Weissenbach, Owen White, Jun Wang, Lixin Zhang, Yu-Guang Zhou, Dawn Field, William B Whitman, George M Garrity, Hans-Peter Klenk
Publié 2014