Genome and plasmid diversity of Extended-Spectrum β-Lactamase-producing Escherichia coli ST131 – tracking phylogenetic trajectories with Bayesian inference

by Sofia Ny, Linus Sandegren, Marco Salemi, Christian G. Giske
Published 2019

Plasmidome-analysis of ESBL-producing escherichia coli using conventional typing and high-throughput sequencing.

by Alma Brolund, Oscar Franzén, Ojar Melefors, Karin Tegmark-Wisell, Linus Sandegren
Published 2013

Selection of a Multidrug Resistance Plasmid by Sublethal Levels of Antibiotics and Heavy Metals

by Erik Gullberg, Lisa M. Albrecht, Christoffer Karlsson, Linus Sandegren, Dan I. Andersson
Published 2014

Detection of structural variations in densely-labelled optical DNA barcodes: A hidden Markov model approach.

by Albertas Dvirnas, Callum Stewart, Vilhelm Müller, Santosh Kumar Bikkarolla, Karolin Frykholm, Linus Sandegren, Erik Kristiansson, Fredrik Westerlund, Tobias Ambjörnsson
Published 2021

Detection of structural variations in densely-labelled optical DNA barcodes: A hidden Markov model approach

by Albertas Dvirnas, Callum Stewart, Vilhelm Müller, Santosh Kumar Bikkarolla, Karolin Frykholm, Linus Sandegren, Erik Kristiansson, Fredrik Westerlund, Tobias Ambjörnsson
Published 2021

Optical DNA Mapping Combined with Cas9-Targeted Resistance Gene Identification for Rapid Tracking of Resistance Plasmids in a Neonatal Intensive Care Unit Outbreak

by Santosh K. Bikkarolla, Viveka Nordberg, Fredrika Rajer, Vilhelm Müller, Muhammad Humaun Kabir, Sriram KK, Albertas Dvirnas, Tobias Ambjörnsson, Christian G. Giske, Lars Navér, Linus Sandegren, Fredrik Westerlund
Published 2019