PLATE-Seq for genome-wide regulatory network analysis of high-throughput screens

by Erin C. Bush, Forest Ray, Mariano J. Alvarez, Ronald Realubit, Hai Li, Charles Karan, Andrea Califano, Peter A. Sims
Published 2017

Quantitative assessment of protein activity in orphan tissues and single cells using the metaVIPER algorithm

by Hongxu Ding, Eugene F. Douglass, Adam M. Sonabend, Angeliki Mela, Sayantan Bose, Christian Gonzalez, Peter D. Canoll, Peter A. Sims, Mariano J. Alvarez, Andrea Califano
Published 2018

Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease

by Peter A. Szabo, Hanna Mendes Levitin, Michelle Miron, Mark E. Snyder, Takashi Senda, Jinzhou Yuan, Yim Ling Cheng, Erin C. Bush, Pranay Dogra, Puspa Thapa, Donna L. Farber, Peter A. Sims
Published 2019