Functional genetic diversity among Mycobacterium tuberculosis complex clinical isolates: delineation of conserved core and lineage-specific transcriptomes during intracellular surv...

par Susanne Homolka, Stefan Niemann, David G Russell, Kyle H Rohde
Publié 2010

High resolution discrimination of clinical Mycobacterium tuberculosis complex strains based on single nucleotide polymorphisms.

par Susanne Homolka, Michaela Projahn, Silke Feuerriegel, Tanja Ubben, Roland Diel, Ulrich Nübel, Stefan Niemann
Publié 2012

A novel multiplex real-time PCR for the identification of mycobacteria associated with zoonotic tuberculosis.

par Kate Reddington, Justin O'Grady, Siobhan Dorai-Raj, Stefan Niemann, Dick van Soolingen, Thomas Barry
Publié 2011

Survival of hypoxia-induced dormancy is not a common feature of all strains of the Mycobacterium tuberculosis complex

par Barbara Tizzano, Tobias K. Dallenga, Christian Utpatel, Jochen Behrends, Susanne Homolka, Thomas A. Kohl, Stefan Niemann
Publié 2021

Clade-Specific Virulence Patterns of <named-content content-type="genus-species">Mycobacterium tuberculosis</named-content> Complex Strains in Human Primary Macrophages and Aerogen...

par Norbert Reiling, Susanne Homolka, Kerstin Walter, Julius Brandenburg, Lisa Niwinski, Martin Ernst, Christian Herzmann, Christoph Lange, Roland Diel, Stefan Ehlers, Stefan Niemann
Publié 2013

High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography.

par Ruth Hershberg, Mikhail Lipatov, Peter M Small, Hadar Sheffer, Stefan Niemann, Susanne Homolka, Jared C Roach, Kristin Kremer, Dmitri A Petrov, Marcus W Feldman, Sebastien Gagneux
Publié 2008

Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study.

par Andreas Roetzer, Roland Diel, Thomas A Kohl, Christian Rückert, Ulrich Nübel, Jochen Blom, Thierry Wirth, Sebastian Jaenicke, Sieglinde Schuback, Sabine Rüsch-Gerdes, Philip Supply, Jörn Kalinowski, Stefan Niemann
Publié 2013

The Genetic Transformation of <named-content content-type="genus-species">Chlamydia pneumoniae</named-content>

par Kensuke Shima, Maximilian Wanker, Rachel J. Skilton, Lesley T. Cutcliffe, Christiane Schnee, Thomas A. Kohl, Stefan Niemann, Javier Geijo, Matthias Klinger, Peter Timms, Thomas Rattei, Konrad Sachse, Ian N. Clarke, Jan Rupp
Publié 2018

Autophagy gene variant IRGM -261T contributes to protection from tuberculosis caused by Mycobacterium tuberculosis but not by M. africanum strains.

par Christopher D Intemann, Thorsten Thye, Stefan Niemann, Edmund N L Browne, Margaret Amanua Chinbuah, Anthony Enimil, John Gyapong, Ivy Osei, Ellis Owusu-Dabo, Susanne Helm, Sabine Rüsch-Gerdes, Rolf D Horstmann, Christian G Meyer
Publié 2009

Treatment of tuberculosis in a region with high drug resistance: outcomes, drug resistance amplification and re-infection.

par Maryline Bonnet, Manuela Pardini, Francesca Meacci, Germano Orrù, Hasan Yesilkaya, Thierry Jarosz, Peter W Andrew, Mike Barer, Francesco Checchi, Heinz Rinder, Graziella Orefici, Sabine Rüsch-Gerdes, Lanfranco Fattorini, Marco Rinaldo Oggioni, Juliet Melzer, Stefan Niemann, Francis Varaine
Publié 2011

Implementation of whole genome sequencing for tuberculosis diagnostics in a low-middle income, high MDR-TB burden country

par Monica Vogel, Christian Utpatel, Caroline Corbett, Thomas A. Kohl, Altyn Iskakova, Sevim Ahmedov, Uladzimir Antonenka, Viola Dreyer, Ainura Ibrahimova, Chynara Kamarli, Dilorom Kosimova, Vanessa Mohr, Evgeni Sahalchyk, Meerim Sydykova, Nagira Umetalieva, Abdylat Kadyrov, Gulmira Kalmambetova, Stefan Niemann, Harald Hoffmann
Publié 2021

<named-content content-type="genus-species">Mycobacterium tuberculosis</named-content> Pyrazinamide Resistance Determinants: a Multicenter Study

par Paolo Miotto, Andrea M. Cabibbe, Silke Feuerriegel, Nicola Casali, Francis Drobniewski, Yulia Rodionova, Daiva Bakonyte, Petras Stakenas, Edita Pimkina, Ewa Augustynowicz-Kopeć, Massimo Degano, Alessandro Ambrosi, Sven Hoffner, Mikael Mansjö, Jim Werngren, Sabine Rüsch-Gerdes, Stefan Niemann, Daniela M. Cirillo
Publié 2014

Correction: Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis

par Phelim Bradley, N. Claire Gordon, Timothy M. Walker, Laura Dunn, Simon Heys, Bill Huang, Sarah Earle, Louise J. Pankhurst, Luke Anson, Mariateresa de Cesare, Paolo Piazza, Antonina A. Votintseva, Tanya Golubchik, Daniel J. Wilson, David H. Wyllie, Roland Diel, Stefan Niemann, Silke Feuerriegel, Thomas A. Kohl, Nazir Ismail, Shaheed V. Omar, E. Grace Smith, David Buck, Gil McVean, A. Sarah Walker, Tim E. A. Peto, Derrick W. Crook, Zamin Iqbal
Publié 2016

The phylogenetic landscape and nosocomial spread of the multidrug-resistant opportunist Stenotrophomonas maltophilia

par Matthias I. Gröschel, Conor J. Meehan, Ivan Barilar, Margo Diricks, Aitor Gonzaga, Matthias Steglich, Oscar Conchillo-Solé, Isabell-Christin Scherer, Uwe Mamat, Christian F. Luz, Katrien De Bruyne, Christian Utpatel, Daniel Yero, Isidre Gibert, Xavier Daura, Stefanie Kampmeier, Nurdyana Abdul Rahman, Michael Kresken, Tjip S. van der Werf, Ifey Alio, Wolfgang R. Streit, Kai Zhou, Thomas Schwartz, John W. A. Rossen, Maha R. Farhat, Ulrich E. Schaible, Ulrich Nübel, Jan Rupp, Joerg Steinmann, Stefan Niemann, Thomas A. Kohl
Publié 2020