Documenting elimination of co-circulating COVID-19 clusters using genomics in New South Wales, Australia

Documenting elimination of co-circulating COVID-19 clusters using genomics in New South Wales, Australia

Abstract Objective To adapt ‘fishplots’ to describe real-time evolution of SARS-CoV-2 genomic clusters. Results This novel analysis adapted the fishplot to depict the size and duration of circulating genomic clusters over time in New South Wales, Australia. It illuminated the effectiveness of interv...

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Detalles Bibliográficos
Autores principales: Alicia Arnott, Jenny Draper, Rebecca J. Rockett, Connie Lam, Rosemarie Sadsad, Mailie Gall, Elena Martinez, Roy Byun, Jennie Musto, Ben Marais, Sharon C.-A. Chen, Jen Kok, Dominic E. Dwyer, Vitali Sintchenko
Formato: article
Lenguaje:EN
Publicado: BMC 2021
Materias:
SARS-CoV-2
Genomic epidemiology
Bioinformatics
Whole genome sequencing
Australia
Medicine
R
Biology (General)
QH301-705.5
Science (General)
Q1-390
Acceso en línea:https://doaj.org/article/00334b117b2c4864a7b36ed6aa576f8e
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Sumario:Abstract Objective To adapt ‘fishplots’ to describe real-time evolution of SARS-CoV-2 genomic clusters. Results This novel analysis adapted the fishplot to depict the size and duration of circulating genomic clusters over time in New South Wales, Australia. It illuminated the effectiveness of interventions on the emergence, spread and eventual elimination of clusters and distilled genomic data into clear information to inform public health action.

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