Analysis of a COVID-19 compartmental model: a mathematical and computational approach

In this note, we consider a compartmental epidemic mathematical model given by a system of differential equations. We provide a complete toolkit for performing both a symbolic and numerical analysis of the spreading of COVID-19. By using the free and open-source programming language Python and the m...

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Autores principales: Zita Abreu, Guillaume Cantin, Cristiana J. Silva
Formato: article
Lenguaje:EN
Publicado: AIMS Press 2021
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Acceso en línea:https://doaj.org/article/0258294d4a9d46e7b5591fb8cb52165c
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spelling oai:doaj.org-article:0258294d4a9d46e7b5591fb8cb52165c2021-11-23T03:01:16ZAnalysis of a COVID-19 compartmental model: a mathematical and computational approach10.3934/mbe.20213961551-0018https://doaj.org/article/0258294d4a9d46e7b5591fb8cb52165c2021-09-01T00:00:00Zhttps://www.aimspress.com/article/doi/10.3934/mbe.2021396?viewType=HTMLhttps://doaj.org/toc/1551-0018In this note, we consider a compartmental epidemic mathematical model given by a system of differential equations. We provide a complete toolkit for performing both a symbolic and numerical analysis of the spreading of COVID-19. By using the free and open-source programming language Python and the mathematical software SageMath, we contribute for the reproducibility of the mathematical analysis of the stability of the equilibrium points of epidemic models and their fitting to real data. The mathematical tools and codes can be adapted to a wide range of mathematical epidemic models.Zita AbreuGuillaume CantinCristiana J. SilvaAIMS Pressarticlesairp epidemic modelcovid-19stability analysisfree and open-source softwarereproducibility of scientific methodBiotechnologyTP248.13-248.65MathematicsQA1-939ENMathematical Biosciences and Engineering, Vol 18, Iss 6, Pp 7979-7998 (2021)
institution DOAJ
collection DOAJ
language EN
topic sairp epidemic model
covid-19
stability analysis
free and open-source software
reproducibility of scientific method
Biotechnology
TP248.13-248.65
Mathematics
QA1-939
spellingShingle sairp epidemic model
covid-19
stability analysis
free and open-source software
reproducibility of scientific method
Biotechnology
TP248.13-248.65
Mathematics
QA1-939
Zita Abreu
Guillaume Cantin
Cristiana J. Silva
Analysis of a COVID-19 compartmental model: a mathematical and computational approach
description In this note, we consider a compartmental epidemic mathematical model given by a system of differential equations. We provide a complete toolkit for performing both a symbolic and numerical analysis of the spreading of COVID-19. By using the free and open-source programming language Python and the mathematical software SageMath, we contribute for the reproducibility of the mathematical analysis of the stability of the equilibrium points of epidemic models and their fitting to real data. The mathematical tools and codes can be adapted to a wide range of mathematical epidemic models.
format article
author Zita Abreu
Guillaume Cantin
Cristiana J. Silva
author_facet Zita Abreu
Guillaume Cantin
Cristiana J. Silva
author_sort Zita Abreu
title Analysis of a COVID-19 compartmental model: a mathematical and computational approach
title_short Analysis of a COVID-19 compartmental model: a mathematical and computational approach
title_full Analysis of a COVID-19 compartmental model: a mathematical and computational approach
title_fullStr Analysis of a COVID-19 compartmental model: a mathematical and computational approach
title_full_unstemmed Analysis of a COVID-19 compartmental model: a mathematical and computational approach
title_sort analysis of a covid-19 compartmental model: a mathematical and computational approach
publisher AIMS Press
publishDate 2021
url https://doaj.org/article/0258294d4a9d46e7b5591fb8cb52165c
work_keys_str_mv AT zitaabreu analysisofacovid19compartmentalmodelamathematicalandcomputationalapproach
AT guillaumecantin analysisofacovid19compartmentalmodelamathematicalandcomputationalapproach
AT cristianajsilva analysisofacovid19compartmentalmodelamathematicalandcomputationalapproach
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