Model-based analysis of sample index hopping reveals its widespread artifacts in multiplexed single-cell RNA-sequencing
Sample index hopping results in various artefacts in multiplexed scRNA-seq experiments. Here, the authors introduce a statistical model to estimate sample index hopping rate in droplet-based scRNA-seq data and show that artifacts can be corrected by purging phantom molecules from the data.
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Autores principales: | Rick Farouni, Haig Djambazian, Lorenzo E. Ferri, Jiannis Ragoussis, Hamed S. Najafabadi |
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Formato: | article |
Lenguaje: | EN |
Publicado: |
Nature Portfolio
2020
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Materias: | |
Acceso en línea: | https://doaj.org/article/037f529200114ff2b18593e0a1a1f12c |
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