R2DT is a framework for predicting and visualising RNA secondary structure using templates

Non-coding RNA function is poorly understood, partly due to the challenge of determining RNA secondary (2D) structure. Here, the authors present a framework for the reproducible prediction and visualization of the 2D structure of a wide array of RNAs, which enables linking RNA sequence to function.

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Autores principales:	Blake A. Sweeney, David Hoksza, Eric P. Nawrocki, Carlos Eduardo Ribas, Fábio Madeira, Jamie J. Cannone, Robin Gutell, Aparna Maddala, Caeden D. Meade, Loren Dean Williams, Anton S. Petrov, Patricia P. Chan, Todd M. Lowe, Robert D. Finn, Anton I. Petrov
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2021
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/08c55853e54b4060954e1a43ffedc3a6
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spelling	oai:doaj.org-article:08c55853e54b4060954e1a43ffedc3a62021-12-02T17:47:02ZR2DT is a framework for predicting and visualising RNA secondary structure using templates10.1038/s41467-021-23555-52041-1723https://doaj.org/article/08c55853e54b4060954e1a43ffedc3a62021-06-01T00:00:00Zhttps://doi.org/10.1038/s41467-021-23555-5https://doaj.org/toc/2041-1723Non-coding RNA function is poorly understood, partly due to the challenge of determining RNA secondary (2D) structure. Here, the authors present a framework for the reproducible prediction and visualization of the 2D structure of a wide array of RNAs, which enables linking RNA sequence to function.Blake A. SweeneyDavid HokszaEric P. NawrockiCarlos Eduardo RibasFábio MadeiraJamie J. CannoneRobin GutellAparna MaddalaCaeden D. MeadeLoren Dean WilliamsAnton S. PetrovPatricia P. ChanTodd M. LoweRobert D. FinnAnton I. PetrovNature PortfolioarticleScienceQENNature Communications, Vol 12, Iss 1, Pp 1-12 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Blake A. Sweeney David Hoksza Eric P. Nawrocki Carlos Eduardo Ribas Fábio Madeira Jamie J. Cannone Robin Gutell Aparna Maddala Caeden D. Meade Loren Dean Williams Anton S. Petrov Patricia P. Chan Todd M. Lowe Robert D. Finn Anton I. Petrov R2DT is a framework for predicting and visualising RNA secondary structure using templates
description	Non-coding RNA function is poorly understood, partly due to the challenge of determining RNA secondary (2D) structure. Here, the authors present a framework for the reproducible prediction and visualization of the 2D structure of a wide array of RNAs, which enables linking RNA sequence to function.
format	article
author	Blake A. Sweeney David Hoksza Eric P. Nawrocki Carlos Eduardo Ribas Fábio Madeira Jamie J. Cannone Robin Gutell Aparna Maddala Caeden D. Meade Loren Dean Williams Anton S. Petrov Patricia P. Chan Todd M. Lowe Robert D. Finn Anton I. Petrov
author_facet	Blake A. Sweeney David Hoksza Eric P. Nawrocki Carlos Eduardo Ribas Fábio Madeira Jamie J. Cannone Robin Gutell Aparna Maddala Caeden D. Meade Loren Dean Williams Anton S. Petrov Patricia P. Chan Todd M. Lowe Robert D. Finn Anton I. Petrov
author_sort	Blake A. Sweeney
title	R2DT is a framework for predicting and visualising RNA secondary structure using templates
title_short	R2DT is a framework for predicting and visualising RNA secondary structure using templates
title_full	R2DT is a framework for predicting and visualising RNA secondary structure using templates
title_fullStr	R2DT is a framework for predicting and visualising RNA secondary structure using templates
title_full_unstemmed	R2DT is a framework for predicting and visualising RNA secondary structure using templates
title_sort	r2dt is a framework for predicting and visualising rna secondary structure using templates
publisher	Nature Portfolio
publishDate	2021
url	https://doaj.org/article/08c55853e54b4060954e1a43ffedc3a6
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R2DT is a framework for predicting and visualising RNA secondary structure using templates

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