Standardizing human brain parcellations

Abstract Using brain atlases to localize regions of interest is a requirement for making neuroscientifically valid statistical inferences. These atlases, represented in volumetric or surface coordinate spaces, can describe brain topology from a variety of perspectives. Although many human brain atla...

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Autores principales:	Ross M. Lawrence, Eric W. Bridgeford, Patrick E. Myers, Ganesh C. Arvapalli, Sandhya C. Ramachandran, Derek A. Pisner, Paige F. Frank, Allison D. Lemmer, Aki Nikolaidis, Joshua T. Vogelstein
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2021
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/0a03d07c74214af68dc50816185fd573
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id	oai:doaj.org-article:0a03d07c74214af68dc50816185fd573
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spelling	oai:doaj.org-article:0a03d07c74214af68dc50816185fd5732021-12-02T15:54:03ZStandardizing human brain parcellations10.1038/s41597-021-00849-32052-4463https://doaj.org/article/0a03d07c74214af68dc50816185fd5732021-03-01T00:00:00Zhttps://doi.org/10.1038/s41597-021-00849-3https://doaj.org/toc/2052-4463Abstract Using brain atlases to localize regions of interest is a requirement for making neuroscientifically valid statistical inferences. These atlases, represented in volumetric or surface coordinate spaces, can describe brain topology from a variety of perspectives. Although many human brain atlases have circulated the field over the past fifty years, limited effort has been devoted to their standardization. Standardization can facilitate consistency and transparency with respect to orientation, resolution, labeling scheme, file storage format, and coordinate space designation. Our group has worked to consolidate an extensive selection of popular human brain atlases into a single, curated, open-source library, where they are stored following a standardized protocol with accompanying metadata, which can serve as the basis for future atlases. The repository containing the atlases, the specification, as well as relevant transformation functions is available in the neuroparc OSF registered repository or https://github.com/neurodata/neuroparc .Ross M. LawrenceEric W. BridgefordPatrick E. MyersGanesh C. ArvapalliSandhya C. RamachandranDerek A. PisnerPaige F. FrankAllison D. LemmerAki NikolaidisJoshua T. VogelsteinNature PortfolioarticleScienceQENScientific Data, Vol 8, Iss 1, Pp 1-9 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Ross M. Lawrence Eric W. Bridgeford Patrick E. Myers Ganesh C. Arvapalli Sandhya C. Ramachandran Derek A. Pisner Paige F. Frank Allison D. Lemmer Aki Nikolaidis Joshua T. Vogelstein Standardizing human brain parcellations
description	Abstract Using brain atlases to localize regions of interest is a requirement for making neuroscientifically valid statistical inferences. These atlases, represented in volumetric or surface coordinate spaces, can describe brain topology from a variety of perspectives. Although many human brain atlases have circulated the field over the past fifty years, limited effort has been devoted to their standardization. Standardization can facilitate consistency and transparency with respect to orientation, resolution, labeling scheme, file storage format, and coordinate space designation. Our group has worked to consolidate an extensive selection of popular human brain atlases into a single, curated, open-source library, where they are stored following a standardized protocol with accompanying metadata, which can serve as the basis for future atlases. The repository containing the atlases, the specification, as well as relevant transformation functions is available in the neuroparc OSF registered repository or https://github.com/neurodata/neuroparc .
format	article
author	Ross M. Lawrence Eric W. Bridgeford Patrick E. Myers Ganesh C. Arvapalli Sandhya C. Ramachandran Derek A. Pisner Paige F. Frank Allison D. Lemmer Aki Nikolaidis Joshua T. Vogelstein
author_facet	Ross M. Lawrence Eric W. Bridgeford Patrick E. Myers Ganesh C. Arvapalli Sandhya C. Ramachandran Derek A. Pisner Paige F. Frank Allison D. Lemmer Aki Nikolaidis Joshua T. Vogelstein
author_sort	Ross M. Lawrence
title	Standardizing human brain parcellations
title_short	Standardizing human brain parcellations
title_full	Standardizing human brain parcellations
title_fullStr	Standardizing human brain parcellations
title_full_unstemmed	Standardizing human brain parcellations
title_sort	standardizing human brain parcellations
publisher	Nature Portfolio
publishDate	2021
url	https://doaj.org/article/0a03d07c74214af68dc50816185fd573
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Standardizing human brain parcellations

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