Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
Pecan is an important specialty crop that has experienced extensive interspecific hybridization and nearly-obligate outcrossing. Here, the authors assemble diploid genomes of four outbred genotypes, identify interspecific introgressions through comparative genomics analyses, and map QTLs associated...
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Nature Portfolio
2021
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oai:doaj.org-article:0b6281592d1b418a9e23bc341e0af9722021-12-02T16:14:57ZFour chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding10.1038/s41467-021-24328-w2041-1723https://doaj.org/article/0b6281592d1b418a9e23bc341e0af9722021-07-01T00:00:00Zhttps://doi.org/10.1038/s41467-021-24328-whttps://doaj.org/toc/2041-1723Pecan is an important specialty crop that has experienced extensive interspecific hybridization and nearly-obligate outcrossing. Here, the authors assemble diploid genomes of four outbred genotypes, identify interspecific introgressions through comparative genomics analyses, and map QTLs associated with pest resistance.John T. LovellNolan B. BentleyGaurab BhattaraiJerry W. JenkinsAvinash SreedasyamYanina AlarconClive BockLori Beth BostonJoseph CarlsonKimberly CervantesKristen ClermontSara DukeNick KromKeith KubenkaSujan MamidiChristopher P. MattisonMaria J. MonterosCristina PisaniChristopher PlottShanmugam RajasekarHormat Shadgou RheinCharles RohlaMingzhou SongRolston St. HilaireShengqiang ShuLenny WellsJenell WebberRichard J. HeeremaPatricia E. KleinPatrick ConnerXinwang WangL. J. GraukeJane GrimwoodJeremy SchmutzJennifer J. RandallNature PortfolioarticleScienceQENNature Communications, Vol 12, Iss 1, Pp 1-12 (2021) |
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DOAJ |
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DOAJ |
| language |
EN |
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Science Q |
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Science Q John T. Lovell Nolan B. Bentley Gaurab Bhattarai Jerry W. Jenkins Avinash Sreedasyam Yanina Alarcon Clive Bock Lori Beth Boston Joseph Carlson Kimberly Cervantes Kristen Clermont Sara Duke Nick Krom Keith Kubenka Sujan Mamidi Christopher P. Mattison Maria J. Monteros Cristina Pisani Christopher Plott Shanmugam Rajasekar Hormat Shadgou Rhein Charles Rohla Mingzhou Song Rolston St. Hilaire Shengqiang Shu Lenny Wells Jenell Webber Richard J. Heerema Patricia E. Klein Patrick Conner Xinwang Wang L. J. Grauke Jane Grimwood Jeremy Schmutz Jennifer J. Randall Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding |
| description |
Pecan is an important specialty crop that has experienced extensive interspecific hybridization and nearly-obligate outcrossing. Here, the authors assemble diploid genomes of four outbred genotypes, identify interspecific introgressions through comparative genomics analyses, and map QTLs associated with pest resistance. |
| format |
article |
| author |
John T. Lovell Nolan B. Bentley Gaurab Bhattarai Jerry W. Jenkins Avinash Sreedasyam Yanina Alarcon Clive Bock Lori Beth Boston Joseph Carlson Kimberly Cervantes Kristen Clermont Sara Duke Nick Krom Keith Kubenka Sujan Mamidi Christopher P. Mattison Maria J. Monteros Cristina Pisani Christopher Plott Shanmugam Rajasekar Hormat Shadgou Rhein Charles Rohla Mingzhou Song Rolston St. Hilaire Shengqiang Shu Lenny Wells Jenell Webber Richard J. Heerema Patricia E. Klein Patrick Conner Xinwang Wang L. J. Grauke Jane Grimwood Jeremy Schmutz Jennifer J. Randall |
| author_facet |
John T. Lovell Nolan B. Bentley Gaurab Bhattarai Jerry W. Jenkins Avinash Sreedasyam Yanina Alarcon Clive Bock Lori Beth Boston Joseph Carlson Kimberly Cervantes Kristen Clermont Sara Duke Nick Krom Keith Kubenka Sujan Mamidi Christopher P. Mattison Maria J. Monteros Cristina Pisani Christopher Plott Shanmugam Rajasekar Hormat Shadgou Rhein Charles Rohla Mingzhou Song Rolston St. Hilaire Shengqiang Shu Lenny Wells Jenell Webber Richard J. Heerema Patricia E. Klein Patrick Conner Xinwang Wang L. J. Grauke Jane Grimwood Jeremy Schmutz Jennifer J. Randall |
| author_sort |
John T. Lovell |
| title |
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding |
| title_short |
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding |
| title_full |
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding |
| title_fullStr |
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding |
| title_full_unstemmed |
Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding |
| title_sort |
four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding |
| publisher |
Nature Portfolio |
| publishDate |
2021 |
| url |
https://doaj.org/article/0b6281592d1b418a9e23bc341e0af972 |
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