Administration of β-lactam antibiotics and delivery method correlate with intestinal abundances of Bifidobacteria and Bacteroides in early infancy, in Japan

Abstract The intestinal microbiome changes dynamically in early infancy. Colonisation by Bifidobacterium and Bacteroides and development of intestinal immunity is interconnected. We performed a prospective observational cohort study to determine the influence of antibiotics taken by the mother immed...

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Autores principales: Naruaki Imoto, Chie Kano, Yumi Aoyagi, Hiroto Morita, Fumitaka Amanuma, Hidekazu Maruyama, Shuko Nojiri, Naoyuki Hashiguchi, Shin Watanabe
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Publicado: Nature Portfolio 2021
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spelling oai:doaj.org-article:0da51fad62ed4f0b9a2816d17e640f962021-12-02T16:30:57ZAdministration of β-lactam antibiotics and delivery method correlate with intestinal abundances of Bifidobacteria and Bacteroides in early infancy, in Japan10.1038/s41598-021-85670-z2045-2322https://doaj.org/article/0da51fad62ed4f0b9a2816d17e640f962021-03-01T00:00:00Zhttps://doi.org/10.1038/s41598-021-85670-zhttps://doaj.org/toc/2045-2322Abstract The intestinal microbiome changes dynamically in early infancy. Colonisation by Bifidobacterium and Bacteroides and development of intestinal immunity is interconnected. We performed a prospective observational cohort study to determine the influence of antibiotics taken by the mother immediately before delivery on the intestinal microbiome of 130 healthy Japanese infants. Faecal samples (383) were collected at 1, 3, and 6 months and analysed using next-generation sequencing. Cefazolin was administered before caesarean sections, whereas ampicillin was administered in cases with premature rupture of the membranes and in Group B Streptococcus-positive cases. Bifidobacterium and Bacteroides were dominant (60–70% mean combined occupancy) at all ages. A low abundance of Bifidobacterium was observed in infants exposed to antibiotics at delivery and at 1 and 3 months, with no difference between delivery methods. A lower abundance of Bacteroides was observed after caesarean section than vaginal delivery, irrespective of antibiotic exposure. Additionally, occupancy by Bifidobacterium at 1 and 3 months and by Bacteroides at 3 months differed between infants with and without siblings. All these differences disappeared at 6 months. Infants exposed to intrapartum antibiotics displayed altered Bifidobacterium abundance, whereas abundance of Bacteroides was largely associated with the delivery method. Existence of siblings also significantly influenced the microbiota composition of infants.Naruaki ImotoChie KanoYumi AoyagiHiroto MoritaFumitaka AmanumaHidekazu MaruyamaShuko NojiriNaoyuki HashiguchiShin WatanabeNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 11, Iss 1, Pp 1-15 (2021)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Naruaki Imoto
Chie Kano
Yumi Aoyagi
Hiroto Morita
Fumitaka Amanuma
Hidekazu Maruyama
Shuko Nojiri
Naoyuki Hashiguchi
Shin Watanabe
Administration of β-lactam antibiotics and delivery method correlate with intestinal abundances of Bifidobacteria and Bacteroides in early infancy, in Japan
description Abstract The intestinal microbiome changes dynamically in early infancy. Colonisation by Bifidobacterium and Bacteroides and development of intestinal immunity is interconnected. We performed a prospective observational cohort study to determine the influence of antibiotics taken by the mother immediately before delivery on the intestinal microbiome of 130 healthy Japanese infants. Faecal samples (383) were collected at 1, 3, and 6 months and analysed using next-generation sequencing. Cefazolin was administered before caesarean sections, whereas ampicillin was administered in cases with premature rupture of the membranes and in Group B Streptococcus-positive cases. Bifidobacterium and Bacteroides were dominant (60–70% mean combined occupancy) at all ages. A low abundance of Bifidobacterium was observed in infants exposed to antibiotics at delivery and at 1 and 3 months, with no difference between delivery methods. A lower abundance of Bacteroides was observed after caesarean section than vaginal delivery, irrespective of antibiotic exposure. Additionally, occupancy by Bifidobacterium at 1 and 3 months and by Bacteroides at 3 months differed between infants with and without siblings. All these differences disappeared at 6 months. Infants exposed to intrapartum antibiotics displayed altered Bifidobacterium abundance, whereas abundance of Bacteroides was largely associated with the delivery method. Existence of siblings also significantly influenced the microbiota composition of infants.
format article
author Naruaki Imoto
Chie Kano
Yumi Aoyagi
Hiroto Morita
Fumitaka Amanuma
Hidekazu Maruyama
Shuko Nojiri
Naoyuki Hashiguchi
Shin Watanabe
author_facet Naruaki Imoto
Chie Kano
Yumi Aoyagi
Hiroto Morita
Fumitaka Amanuma
Hidekazu Maruyama
Shuko Nojiri
Naoyuki Hashiguchi
Shin Watanabe
author_sort Naruaki Imoto
title Administration of β-lactam antibiotics and delivery method correlate with intestinal abundances of Bifidobacteria and Bacteroides in early infancy, in Japan
title_short Administration of β-lactam antibiotics and delivery method correlate with intestinal abundances of Bifidobacteria and Bacteroides in early infancy, in Japan
title_full Administration of β-lactam antibiotics and delivery method correlate with intestinal abundances of Bifidobacteria and Bacteroides in early infancy, in Japan
title_fullStr Administration of β-lactam antibiotics and delivery method correlate with intestinal abundances of Bifidobacteria and Bacteroides in early infancy, in Japan
title_full_unstemmed Administration of β-lactam antibiotics and delivery method correlate with intestinal abundances of Bifidobacteria and Bacteroides in early infancy, in Japan
title_sort administration of β-lactam antibiotics and delivery method correlate with intestinal abundances of bifidobacteria and bacteroides in early infancy, in japan
publisher Nature Portfolio
publishDate 2021
url https://doaj.org/article/0da51fad62ed4f0b9a2816d17e640f96
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