Deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses

DNA barcoding is a promising technology for the simultaneous analysis of genetic and phenotypic heterogeneity. Here, the authors combine DNA barcoding and single-cell RNA-seq to study heterogeneity, progression and response to therapy in B-cell acute lymphoblastic leukaemia patient-derived xenograft...

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Autores principales: Humberto Contreras-Trujillo, Jiya Eerdeng, Samir Akre, Du Jiang, Jorge Contreras, Basia Gala, Mary C. Vergel-Rodriguez, Yeachan Lee, Aparna Jorapur, Areen Andreasian, Lisa Harton, Charles S. Bramlett, Anna Nogalska, Gang Xiao, Jae-Woong Lee, Lai N. Chan, Markus Müschen, Akil A. Merchant, Rong Lu
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Publicado: Nature Portfolio 2021
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Acceso en línea:https://doaj.org/article/1cf0a0d2c96e4d41be8c44bd2d61e2d2
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spelling oai:doaj.org-article:1cf0a0d2c96e4d41be8c44bd2d61e2d22021-11-14T12:36:42ZDeciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses10.1038/s41467-021-26771-12041-1723https://doaj.org/article/1cf0a0d2c96e4d41be8c44bd2d61e2d22021-11-01T00:00:00Zhttps://doi.org/10.1038/s41467-021-26771-1https://doaj.org/toc/2041-1723DNA barcoding is a promising technology for the simultaneous analysis of genetic and phenotypic heterogeneity. Here, the authors combine DNA barcoding and single-cell RNA-seq to study heterogeneity, progression and response to therapy in B-cell acute lymphoblastic leukaemia patient-derived xenografts.Humberto Contreras-TrujilloJiya EerdengSamir AkreDu JiangJorge ContrerasBasia GalaMary C. Vergel-RodriguezYeachan LeeAparna JorapurAreen AndreasianLisa HartonCharles S. BramlettAnna NogalskaGang XiaoJae-Woong LeeLai N. ChanMarkus MüschenAkil A. MerchantRong LuNature PortfolioarticleScienceQENNature Communications, Vol 12, Iss 1, Pp 1-14 (2021)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Humberto Contreras-Trujillo
Jiya Eerdeng
Samir Akre
Du Jiang
Jorge Contreras
Basia Gala
Mary C. Vergel-Rodriguez
Yeachan Lee
Aparna Jorapur
Areen Andreasian
Lisa Harton
Charles S. Bramlett
Anna Nogalska
Gang Xiao
Jae-Woong Lee
Lai N. Chan
Markus Müschen
Akil A. Merchant
Rong Lu
Deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses
description DNA barcoding is a promising technology for the simultaneous analysis of genetic and phenotypic heterogeneity. Here, the authors combine DNA barcoding and single-cell RNA-seq to study heterogeneity, progression and response to therapy in B-cell acute lymphoblastic leukaemia patient-derived xenografts.
format article
author Humberto Contreras-Trujillo
Jiya Eerdeng
Samir Akre
Du Jiang
Jorge Contreras
Basia Gala
Mary C. Vergel-Rodriguez
Yeachan Lee
Aparna Jorapur
Areen Andreasian
Lisa Harton
Charles S. Bramlett
Anna Nogalska
Gang Xiao
Jae-Woong Lee
Lai N. Chan
Markus Müschen
Akil A. Merchant
Rong Lu
author_facet Humberto Contreras-Trujillo
Jiya Eerdeng
Samir Akre
Du Jiang
Jorge Contreras
Basia Gala
Mary C. Vergel-Rodriguez
Yeachan Lee
Aparna Jorapur
Areen Andreasian
Lisa Harton
Charles S. Bramlett
Anna Nogalska
Gang Xiao
Jae-Woong Lee
Lai N. Chan
Markus Müschen
Akil A. Merchant
Rong Lu
author_sort Humberto Contreras-Trujillo
title Deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses
title_short Deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses
title_full Deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses
title_fullStr Deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses
title_full_unstemmed Deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses
title_sort deciphering intratumoral heterogeneity using integrated clonal tracking and single-cell transcriptome analyses
publisher Nature Portfolio
publishDate 2021
url https://doaj.org/article/1cf0a0d2c96e4d41be8c44bd2d61e2d2
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