Multiple pH regime molecular dynamics simulation for pK calculations.

Ionisation equilibria in proteins are influenced by conformational flexibility, which can in principle be accounted for by molecular dynamics simulation. One problem in this method is the bias arising from the fixed protonation state during the simulation. Its effect is mostly exhibited when the ion...

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Bibliographic Details
Main Authors: Lennart Nilsson, Andrey Karshikoff
Format: article
Language:EN
Published: Public Library of Science (PLoS) 2011
Subjects:
R
Q
Online Access:https://doaj.org/article/1e773806b6c04856ae9d4c05aae87b5d
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