Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers

Abstract. Sabdanawaty FP, Purnomo, Daryono BS. 2021. Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers. Biodiversitas 22: 193-198. Api-api (Avicennia spp.) from mangrove groups is rich in economic and e...

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Autores principales:	fennalia putri sabdanawaty, Purnomo PURNOMO, Budi Setyadi Daryono
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2020
Materias:	api-api mangroves, avicennia, issr marker, molecular characters, morphological characters Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/22a73dea87844165b8f4b36396306ba5
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spelling	oai:doaj.org-article:22a73dea87844165b8f4b36396306ba52021-11-22T00:53:57ZSpecies diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers1412-033X2085-472210.13057/biodiv/d220125https://doaj.org/article/22a73dea87844165b8f4b36396306ba52020-12-01T00:00:00Zhttps://smujo.id/biodiv/article/view/6456https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Abstract. Sabdanawaty FP, Purnomo, Daryono BS. 2021. Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers. Biodiversitas 22: 193-198. Api-api (Avicennia spp.) from mangrove groups is rich in economic and ecological benefits. Research on the potential of api-api has been extensively done, but no research is specifically focused on the identification of api-api. This study aims to identify species diversity and phenetic relationships of api-api in Java based on morphological and molecular characters. The morphological analysis was based on 35 characters and referred to the descriptor. The PCA analysis on the morphological characters of Avicennia spp. showed a high diversity. Morphological characters have a high effect on grouping patterns such as habitat, leaf shape, leaf tip, leaf base, and petal color. Molecular observations were done on the polymorphism of DNA bands. The ISSR primers used were ISSR02, ISSR04, and ISSR10. PCR amplification of DNA was separated and visualized using a doc gel electrophoresis. The results showed a high diversity based on the percentage of DNA polymorphism. The research resulted in three species of Avicennia spp. in Java, namely Avicennia officinalis, A. alba, and A. marina. Phenetic relationships between Avicennia spp. form was based on similarity in character, not based on the area of origin. The environmental conditions in this study slightly opposed the character of Avicennia spp., which presumably due to the similarity in various marine areas of Java such as temperature, pH, and the required salinity.fennalia putri sabdanawatyPurnomo PURNOMOBudi Setyadi DaryonoMBI & UNS Soloarticleapi-api mangroves, avicennia, issr marker, molecular characters, morphological charactersBiology (General)QH301-705.5ENBiodiversitas, Vol 22, Iss 1 (2020)
institution	DOAJ
collection	DOAJ
language	EN
topic	api-api mangroves, avicennia, issr marker, molecular characters, morphological characters Biology (General) QH301-705.5
spellingShingle	api-api mangroves, avicennia, issr marker, molecular characters, morphological characters Biology (General) QH301-705.5 fennalia putri sabdanawaty Purnomo PURNOMO Budi Setyadi Daryono Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers
description	Abstract. Sabdanawaty FP, Purnomo, Daryono BS. 2021. Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers. Biodiversitas 22: 193-198. Api-api (Avicennia spp.) from mangrove groups is rich in economic and ecological benefits. Research on the potential of api-api has been extensively done, but no research is specifically focused on the identification of api-api. This study aims to identify species diversity and phenetic relationships of api-api in Java based on morphological and molecular characters. The morphological analysis was based on 35 characters and referred to the descriptor. The PCA analysis on the morphological characters of Avicennia spp. showed a high diversity. Morphological characters have a high effect on grouping patterns such as habitat, leaf shape, leaf tip, leaf base, and petal color. Molecular observations were done on the polymorphism of DNA bands. The ISSR primers used were ISSR02, ISSR04, and ISSR10. PCR amplification of DNA was separated and visualized using a doc gel electrophoresis. The results showed a high diversity based on the percentage of DNA polymorphism. The research resulted in three species of Avicennia spp. in Java, namely Avicennia officinalis, A. alba, and A. marina. Phenetic relationships between Avicennia spp. form was based on similarity in character, not based on the area of origin. The environmental conditions in this study slightly opposed the character of Avicennia spp., which presumably due to the similarity in various marine areas of Java such as temperature, pH, and the required salinity.
format	article
author	fennalia putri sabdanawaty Purnomo PURNOMO Budi Setyadi Daryono
author_facet	fennalia putri sabdanawaty Purnomo PURNOMO Budi Setyadi Daryono
author_sort	fennalia putri sabdanawaty
title	Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers
title_short	Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers
title_full	Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers
title_fullStr	Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers
title_full_unstemmed	Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers
title_sort	species diversity and phenetic relationship among accessions of api-api (avicennia spp.) in java based on morphological characters and issr markers
publisher	MBI & UNS Solo
publishDate	2020
url	https://doaj.org/article/22a73dea87844165b8f4b36396306ba5
work_keys_str_mv	AT fennaliaputrisabdanawaty speciesdiversityandpheneticrelationshipamongaccessionsofapiapiavicenniasppinjavabasedonmorphologicalcharactersandissrmarkers AT purnomopurnomo speciesdiversityandpheneticrelationshipamongaccessionsofapiapiavicenniasppinjavabasedonmorphologicalcharactersandissrmarkers AT budisetyadidaryono speciesdiversityandpheneticrelationshipamongaccessionsofapiapiavicenniasppinjavabasedonmorphologicalcharactersandissrmarkers
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Species diversity and phenetic relationship among accessions of api-api (Avicennia spp.) in Java based on morphological characters and ISSR markers

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