Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity

This study helped uncover the biosynthesis potential of forest soils via exploration of shotgun metagenome and amplicon sequencing methods and showed that both methods are needed to expose the full microbial diversity in soil. Based on our metagenome mining results, we suggest revising the historic...

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Autores principales:	Shrikant S. Mantri, Timo Negri, Helena Sales-Ortells, Angel Angelov, Silke Peter, Harald Neidhardt, Yvonne Oelmann, Nadine Ziemert
Formato:	article
Lenguaje:	EN
Publicado:	American Society for Microbiology 2021
Materias:	Microbiology QR1-502
Acceso en línea:	https://doaj.org/article/22d5050783104f63a9897b06e6a18fef
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spelling	oai:doaj.org-article:22d5050783104f63a9897b06e6a18fef2021-12-02T19:44:32ZMetagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity2379-507710.1128/mSystems.01018-21https://doaj.org/article/22d5050783104f63a9897b06e6a18fef2021-10-01T00:00:00Zhttps://journals.asm.org/doi/10.1128/mSystems.01018-21https://doaj.org/toc/2379-5077 This study helped uncover the biosynthesis potential of forest soils via exploration of shotgun metagenome and amplicon sequencing methods and showed that both methods are needed to expose the full microbial diversity in soil. Based on our metagenome mining results, we suggest revising the historical strategy of sampling soils from far-flung places, as we found a significant number of novel and diverse BGCs and domains even in different soils that are very close to each other.Shrikant S. MantriTimo NegriHelena Sales-OrtellsAngel AngelovSilke PeterHarald NeidhardtYvonne OelmannNadine ZiemertAmerican Society for MicrobiologyarticleMicrobiologyQR1-502ENmSystems, Vol 6, Iss 5 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Microbiology QR1-502
spellingShingle	Microbiology QR1-502 Shrikant S. Mantri Timo Negri Helena Sales-Ortells Angel Angelov Silke Peter Harald Neidhardt Yvonne Oelmann Nadine Ziemert Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity
description	This study helped uncover the biosynthesis potential of forest soils via exploration of shotgun metagenome and amplicon sequencing methods and showed that both methods are needed to expose the full microbial diversity in soil. Based on our metagenome mining results, we suggest revising the historical strategy of sampling soils from far-flung places, as we found a significant number of novel and diverse BGCs and domains even in different soils that are very close to each other.
format	article
author	Shrikant S. Mantri Timo Negri Helena Sales-Ortells Angel Angelov Silke Peter Harald Neidhardt Yvonne Oelmann Nadine Ziemert
author_facet	Shrikant S. Mantri Timo Negri Helena Sales-Ortells Angel Angelov Silke Peter Harald Neidhardt Yvonne Oelmann Nadine Ziemert
author_sort	Shrikant S. Mantri
title	Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity
title_short	Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity
title_full	Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity
title_fullStr	Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity
title_full_unstemmed	Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity
title_sort	metagenomic sequencing of multiple soil horizons and sites in close vicinity revealed novel secondary metabolite diversity
publisher	American Society for Microbiology
publishDate	2021
url	https://doaj.org/article/22d5050783104f63a9897b06e6a18fef
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Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity

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