TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution

ABSTRACT Taxonomy assignment of freshwater microbial communities is limited by the minimally curated phylogenies used for large taxonomy databases. Here we introduce TaxAss, a taxonomy assignment workflow that classifies 16S rRNA gene amplicon data using two taxonomy reference databases: a large com...

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Autores principales: Robin R. Rohwer, Joshua J. Hamilton, Ryan J. Newton, Katherine D. McMahon
Formato: article
Lenguaje:EN
Publicado: American Society for Microbiology 2018
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Acceso en línea:https://doaj.org/article/2a8da9d167d2420f916099567fa13277
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