Comparative Analysis of Serum Proteins Between Hepatitis B Virus Genotypes B and C Infection by DIA-Based Quantitative Proteomics
Yunqing Chen,1,2 Dahai Wei,1– 3 Min Deng1– 3 1Department of Infectious Diseases, Affiliated Hospital of Jiaxing University, Jiaxing, People’s Republic of China; 2Department of Infectious Diseases, First Hospital of Jiaxing, Jiaxing, People’s Republic of China; 3Institute of Hepatology, Affiliated Ho...
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Dove Medical Press
2021
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oai:doaj.org-article:2ea7827b26644a3a80b82de6694db1f72021-11-09T18:40:35ZComparative Analysis of Serum Proteins Between Hepatitis B Virus Genotypes B and C Infection by DIA-Based Quantitative Proteomics1178-6973https://doaj.org/article/2ea7827b26644a3a80b82de6694db1f72021-11-01T00:00:00Zhttps://www.dovepress.com/comparative-analysis-of-serum-proteins-between-hepatitis-b-virus-genot-peer-reviewed-fulltext-article-IDRhttps://doaj.org/toc/1178-6973Yunqing Chen,1,2 Dahai Wei,1– 3 Min Deng1– 3 1Department of Infectious Diseases, Affiliated Hospital of Jiaxing University, Jiaxing, People’s Republic of China; 2Department of Infectious Diseases, First Hospital of Jiaxing, Jiaxing, People’s Republic of China; 3Institute of Hepatology, Affiliated Hospital of Jiaxing University, Jiaxing, People’s Republic of ChinaCorrespondence: Dahai Wei; Min DengDepartment of Infectious Diseases, The Affiliated Hospital of Jiaxing University, 1882 South Zhonghuan Road, Jiaxing, 314001, People’s Republic of ChinaTel/Fax +86-573-89975669Email weidahai3166@hotmail.com; milixiaozhu@163.comPurpose: In clinical practice, the clinicopathological profiles and outcomes of patients infected with hepatitis B virus (HBV) are different between genotypes B and C. However, little is known about the potential mechanism and differences in specific biological pathways associated with the different genotype. This study aimed to compare the serum protein profile between patients infected with HBV genotype B and those infected with HBV genotype C.Patients and Methods: A total of 54 serum samples from patients with chronic HBV genotype B infection and those with chronic HBV genotype C infection, and healthy controls were used for the proteomic analysis (n = 18 samples in per group). Serum proteomic profiles were analyzed using data-independent acquisition (DIA)-based liquid chromatography-mass spectrometry to identify differentially expressed proteins (up- or downregulation of at least 1.5-fold) between serum samples from HBV patients infected with HBV genotype B and those infected with genotype C.Results: We identified 1010 proteins, 53 of which were differentially expressed between the serum samples of the healthy controls and those of HBV genotype B infected patients, and 59 that were differentially expressed between the samples of the healthy controls and those of HBV genotype C infected patients. Furthermore, our results indicated that two proteins identified as being differentially expressed (VWF and C8B) have potential as biomarkers for distinguishing genotype B infected HBV patients from those infected with genotype C.Conclusion: The results of our DIA-based quantitative proteomic analysis revealed that HBV genotypes B and C are associated with different molecular profiles and may provide fundamental information for further detailed investigations of the molecular mechanism underlying these differences.Keywords: serum protein profiles, complement and coagulation cascade, von Willebrand factor, complement C8 beta chainChen YWei DDeng MDove Medical Pressarticleserum protein profilescomplement and coagulation cascadevon willebrand factorcomplement c8 beta chainInfectious and parasitic diseasesRC109-216ENInfection and Drug Resistance, Vol Volume 14, Pp 4701-4715 (2021) |
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serum protein profiles complement and coagulation cascade von willebrand factor complement c8 beta chain Infectious and parasitic diseases RC109-216 |
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serum protein profiles complement and coagulation cascade von willebrand factor complement c8 beta chain Infectious and parasitic diseases RC109-216 Chen Y Wei D Deng M Comparative Analysis of Serum Proteins Between Hepatitis B Virus Genotypes B and C Infection by DIA-Based Quantitative Proteomics |
| description |
Yunqing Chen,1,2 Dahai Wei,1– 3 Min Deng1– 3 1Department of Infectious Diseases, Affiliated Hospital of Jiaxing University, Jiaxing, People’s Republic of China; 2Department of Infectious Diseases, First Hospital of Jiaxing, Jiaxing, People’s Republic of China; 3Institute of Hepatology, Affiliated Hospital of Jiaxing University, Jiaxing, People’s Republic of ChinaCorrespondence: Dahai Wei; Min DengDepartment of Infectious Diseases, The Affiliated Hospital of Jiaxing University, 1882 South Zhonghuan Road, Jiaxing, 314001, People’s Republic of ChinaTel/Fax +86-573-89975669Email weidahai3166@hotmail.com; milixiaozhu@163.comPurpose: In clinical practice, the clinicopathological profiles and outcomes of patients infected with hepatitis B virus (HBV) are different between genotypes B and C. However, little is known about the potential mechanism and differences in specific biological pathways associated with the different genotype. This study aimed to compare the serum protein profile between patients infected with HBV genotype B and those infected with HBV genotype C.Patients and Methods: A total of 54 serum samples from patients with chronic HBV genotype B infection and those with chronic HBV genotype C infection, and healthy controls were used for the proteomic analysis (n = 18 samples in per group). Serum proteomic profiles were analyzed using data-independent acquisition (DIA)-based liquid chromatography-mass spectrometry to identify differentially expressed proteins (up- or downregulation of at least 1.5-fold) between serum samples from HBV patients infected with HBV genotype B and those infected with genotype C.Results: We identified 1010 proteins, 53 of which were differentially expressed between the serum samples of the healthy controls and those of HBV genotype B infected patients, and 59 that were differentially expressed between the samples of the healthy controls and those of HBV genotype C infected patients. Furthermore, our results indicated that two proteins identified as being differentially expressed (VWF and C8B) have potential as biomarkers for distinguishing genotype B infected HBV patients from those infected with genotype C.Conclusion: The results of our DIA-based quantitative proteomic analysis revealed that HBV genotypes B and C are associated with different molecular profiles and may provide fundamental information for further detailed investigations of the molecular mechanism underlying these differences.Keywords: serum protein profiles, complement and coagulation cascade, von Willebrand factor, complement C8 beta chain |
| format |
article |
| author |
Chen Y Wei D Deng M |
| author_facet |
Chen Y Wei D Deng M |
| author_sort |
Chen Y |
| title |
Comparative Analysis of Serum Proteins Between Hepatitis B Virus Genotypes B and C Infection by DIA-Based Quantitative Proteomics |
| title_short |
Comparative Analysis of Serum Proteins Between Hepatitis B Virus Genotypes B and C Infection by DIA-Based Quantitative Proteomics |
| title_full |
Comparative Analysis of Serum Proteins Between Hepatitis B Virus Genotypes B and C Infection by DIA-Based Quantitative Proteomics |
| title_fullStr |
Comparative Analysis of Serum Proteins Between Hepatitis B Virus Genotypes B and C Infection by DIA-Based Quantitative Proteomics |
| title_full_unstemmed |
Comparative Analysis of Serum Proteins Between Hepatitis B Virus Genotypes B and C Infection by DIA-Based Quantitative Proteomics |
| title_sort |
comparative analysis of serum proteins between hepatitis b virus genotypes b and c infection by dia-based quantitative proteomics |
| publisher |
Dove Medical Press |
| publishDate |
2021 |
| url |
https://doaj.org/article/2ea7827b26644a3a80b82de6694db1f7 |
| work_keys_str_mv |
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