lra: A long read aligner for sequences and contigs.

It is computationally challenging to detect variation by aligning single-molecule sequencing (SMS) reads, or contigs from SMS assemblies. One approach to efficiently align SMS reads is sparse dynamic programming (SDP), where optimal chains of exact matches are found between the sequence and the geno...

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Bibliographic Details
Main Authors: Jingwen Ren, Mark J P Chaisson
Format: article
Language:EN
Published: Public Library of Science (PLoS) 2021
Subjects:
Online Access:https://doaj.org/article/374191bdee9242da9ac6ee49931ee816
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