SNP and Phylogenetic Characterization of Low Viral Load SARS-CoV-2 Specimens by Target Enrichment

SNP and Phylogenetic Characterization of Low Viral Load SARS-CoV-2 Specimens by Target Enrichment

Background: Surveillance of SARS-CoV-2 across the globe has enabled detection of new variants and informed the public health response. With highly sensitive methods like qPCR widely adopted for diagnosis, the ability to sequence and characterize specimens with low titers needs to keep pace.Methods:...

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Auteurs principaux: Gregory S. Orf, Kenn Forberg, Todd V. Meyer, Illya Mowerman, Aurash Mohaimani, Matthew L. Faron, Cheryl Jennings, Alan L. Landay, D. Yitz Goldstein, Amy S. Fox, Michael G. Berg, Gavin A. Cloherty
Format: article
Langue:EN
Publié: Frontiers Media S.A. 2021
Sujets:
next generation (deep) sequencing (NGS)
target enrichment
SARS-CoV-2
xGen
coronavirus-COVID-19
Microbiology
QR1-502
Accès en ligne:https://doaj.org/article/393b01cbacfe4d0f894543f184a3c6d2
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https://doaj.org/article/393b01cbacfe4d0f894543f184a3c6d2

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