The origin of pesisir cattle based on D-loop mitochondrial DNA

Abstract. Putri AE, Farajallah A, Perwitasari D. 2019. The origin of pesisir cattle based on D-loop mitochondrial DNA. Biodiversitas 20: 2569-2575. Pesisir cattle is one of Indonesia's local cattle descended from Bos indicus which has small body characteristics. It was assumed due to crossbreed...

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Autores principales:	Anzalia Eka Putri, ACHMAD FARAJALLAH, DYAH PERWITASARI
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2019
Materias:	bos indicus, dna, d-loop, mitochondria, pesisir cattle Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/3a54b73aee624df8a565f6d41e0b7e56
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spelling	oai:doaj.org-article:3a54b73aee624df8a565f6d41e0b7e562021-11-21T21:54:26ZThe origin of pesisir cattle based on D-loop mitochondrial DNA1412-033X2085-472210.13057/biodiv/d200919https://doaj.org/article/3a54b73aee624df8a565f6d41e0b7e562019-08-01T00:00:00Zhttps://smujo.id/biodiv/article/view/4151https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Abstract. Putri AE, Farajallah A, Perwitasari D. 2019. The origin of pesisir cattle based on D-loop mitochondrial DNA. Biodiversitas 20: 2569-2575. Pesisir cattle is one of Indonesia's local cattle descended from Bos indicus which has small body characteristics. It was assumed due to crossbreeding between pesisir cattle and other cattle. Therefore this study aims to study the origin of pesisir cattle based on the D-loop mtDNA region and to find out the phylogenetic relationships between pesisir cattle and other cattle. Cattle blood samples were taken in two locations, Krui Way and Tanah Rekah. Amplification of the mitochondrial gene using the primary pair of collections of Dr. Achmad Farajallah, namely AF22 (forward) 5'-GCGTACGCAATCTTACGATCA-3' and AF23 (reverse) 5'-ATGCAGTTAAGTCCAGCTAC-3'. Reconstruction of phylogenetic trees was analyzed using the Neighbor-Joining Method based on Kimura 2 Parameters. The results of the mtDNA analysis in the D-loop region showed that there were two broods in pesisir cattle, namely Bos indicus and Bos javanicus. The closeness between these species is due to the close geographical distance between Bos indicus originating from Way Krui, Lampung and Bos javanicus from Java.Anzalia Eka PutriACHMAD FARAJALLAHDYAH PERWITASARIMBI & UNS Soloarticlebos indicus, dna, d-loop, mitochondria, pesisir cattleBiology (General)QH301-705.5ENBiodiversitas, Vol 20, Iss 9 (2019)
institution	DOAJ
collection	DOAJ
language	EN
topic	bos indicus, dna, d-loop, mitochondria, pesisir cattle Biology (General) QH301-705.5
spellingShingle	bos indicus, dna, d-loop, mitochondria, pesisir cattle Biology (General) QH301-705.5 Anzalia Eka Putri ACHMAD FARAJALLAH DYAH PERWITASARI The origin of pesisir cattle based on D-loop mitochondrial DNA
description	Abstract. Putri AE, Farajallah A, Perwitasari D. 2019. The origin of pesisir cattle based on D-loop mitochondrial DNA. Biodiversitas 20: 2569-2575. Pesisir cattle is one of Indonesia's local cattle descended from Bos indicus which has small body characteristics. It was assumed due to crossbreeding between pesisir cattle and other cattle. Therefore this study aims to study the origin of pesisir cattle based on the D-loop mtDNA region and to find out the phylogenetic relationships between pesisir cattle and other cattle. Cattle blood samples were taken in two locations, Krui Way and Tanah Rekah. Amplification of the mitochondrial gene using the primary pair of collections of Dr. Achmad Farajallah, namely AF22 (forward) 5'-GCGTACGCAATCTTACGATCA-3' and AF23 (reverse) 5'-ATGCAGTTAAGTCCAGCTAC-3'. Reconstruction of phylogenetic trees was analyzed using the Neighbor-Joining Method based on Kimura 2 Parameters. The results of the mtDNA analysis in the D-loop region showed that there were two broods in pesisir cattle, namely Bos indicus and Bos javanicus. The closeness between these species is due to the close geographical distance between Bos indicus originating from Way Krui, Lampung and Bos javanicus from Java.
format	article
author	Anzalia Eka Putri ACHMAD FARAJALLAH DYAH PERWITASARI
author_facet	Anzalia Eka Putri ACHMAD FARAJALLAH DYAH PERWITASARI
author_sort	Anzalia Eka Putri
title	The origin of pesisir cattle based on D-loop mitochondrial DNA
title_short	The origin of pesisir cattle based on D-loop mitochondrial DNA
title_full	The origin of pesisir cattle based on D-loop mitochondrial DNA
title_fullStr	The origin of pesisir cattle based on D-loop mitochondrial DNA
title_full_unstemmed	The origin of pesisir cattle based on D-loop mitochondrial DNA
title_sort	origin of pesisir cattle based on d-loop mitochondrial dna
publisher	MBI & UNS Solo
publishDate	2019
url	https://doaj.org/article/3a54b73aee624df8a565f6d41e0b7e56
work_keys_str_mv	AT anzaliaekaputri theoriginofpesisircattlebasedondloopmitochondrialdna AT achmadfarajallah theoriginofpesisircattlebasedondloopmitochondrialdna AT dyahperwitasari theoriginofpesisircattlebasedondloopmitochondrialdna AT anzaliaekaputri originofpesisircattlebasedondloopmitochondrialdna AT achmadfarajallah originofpesisircattlebasedondloopmitochondrialdna AT dyahperwitasari originofpesisircattlebasedondloopmitochondrialdna
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The origin of pesisir cattle based on D-loop mitochondrial DNA

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