Analysis of human metabolism by reducing the complexity of the genome-scale models using redHUMAN

The complexity of genome-scale metabolic networks (GEMs) hinders their application in specific physiological contexts. Here, the authors introduce a framework to reduce thermodynamically curated GEMs to the subnetworks of interest and demonstrate its application by deriving leukemia-specific models.

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Bibliographic Details
Main Authors: Maria Masid, Meric Ataman, Vassily Hatzimanikatis
Format: article
Language:EN
Published: Nature Portfolio 2020
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Online Access:https://doaj.org/article/3d41aec2fe0240f39f36e6ac9ec3d22c
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Summary:The complexity of genome-scale metabolic networks (GEMs) hinders their application in specific physiological contexts. Here, the authors introduce a framework to reduce thermodynamically curated GEMs to the subnetworks of interest and demonstrate its application by deriving leukemia-specific models.