Unraveling the Metabolic Requirements of the Gut Commensal Bacteroides ovatus

Background: Bacteroidetes are the most common bacterial phylum in the mammalian intestine and the effects of several Bacteroides spp. on multiple facets of host physiology have been previously described. Of the Bacteroides spp., Bacteroides ovatus has recently garnered attention due to its beneficia...

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Autores principales: Robert Fultz, Taylor Ticer, Faith D. Ihekweazu, Thomas D. Horvath, Sigmund J. Haidacher, Kathleen M. Hoch, Meghna Bajaj, Jennifer K. Spinler, Anthony M. Haag, Shelly A. Buffington, Melinda A. Engevik
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Publicado: Frontiers Media S.A. 2021
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spelling oai:doaj.org-article:3f81ecd7e8bc48e2bb3e0901f01bfe382021-12-01T01:26:33ZUnraveling the Metabolic Requirements of the Gut Commensal Bacteroides ovatus1664-302X10.3389/fmicb.2021.745469https://doaj.org/article/3f81ecd7e8bc48e2bb3e0901f01bfe382021-11-01T00:00:00Zhttps://www.frontiersin.org/articles/10.3389/fmicb.2021.745469/fullhttps://doaj.org/toc/1664-302XBackground: Bacteroidetes are the most common bacterial phylum in the mammalian intestine and the effects of several Bacteroides spp. on multiple facets of host physiology have been previously described. Of the Bacteroides spp., Bacteroides ovatus has recently garnered attention due to its beneficial effects in the context of intestinal inflammation. In this study, we aimed to examine model host intestinal physiological conditions and dietary modifications to characterize their effects on B. ovatus growth.Methods and Results: Using Biolog phenotypic microarrays, we evaluated 62 primary carbon sources and determined that B. ovatus ATCC 8384 can use the following carbohydrates as primary carbon sources: 10 disaccharides, 4 trisaccharides, 4 polysaccharides, 4 polymers, 3 L-linked sugars, 6 D-linked sugars, 5 amino-sugars, 6 alcohol sugars, and 15 organic acids. Proteomic profiling of B. ovatus bacteria revealed that a significant portion of the B. ovatus proteome contains proteins important for metabolism. Among the proteins, we found glycosyl hydrolase (GH) familes GH2, GH5, GH20, GH 43, GH88, GH92, and GH95. We also identified multiple proteins with antioxidant properties and reasoned that these proteins may support B. ovatus growth in the GI tract. Upon further testing, we showed that B. ovatus grew robustly in various pH, osmolarity, bile, ethanol, and H2O2 concentrations; indicating that B. ovatus is a well-adapted gut microbe.Conclusion: Taken together, we have demonstrated that key host and diet-derived changes in the intestinal environment influence B. ovatus growth. These data provide the framework for future work toward understanding how diet and lifestyle interventions may promote a beneficial environment for B. ovatus growth.Robert FultzTaylor TicerFaith D. IhekweazuFaith D. IhekweazuThomas D. HorvathThomas D. HorvathSigmund J. HaidacherSigmund J. HaidacherKathleen M. HochKathleen M. HochMeghna BajajJennifer K. SpinlerJennifer K. SpinlerAnthony M. HaagAnthony M. HaagShelly A. BuffingtonMelinda A. EngevikFrontiers Media S.A.articleBacteroidesmetabolismcarbohydratespolysaccharidesintestinecommensalMicrobiologyQR1-502ENFrontiers in Microbiology, Vol 12 (2021)
institution DOAJ
collection DOAJ
language EN
topic Bacteroides
metabolism
carbohydrates
polysaccharides
intestine
commensal
Microbiology
QR1-502
spellingShingle Bacteroides
metabolism
carbohydrates
polysaccharides
intestine
commensal
Microbiology
QR1-502
Robert Fultz
Taylor Ticer
Faith D. Ihekweazu
Faith D. Ihekweazu
Thomas D. Horvath
Thomas D. Horvath
Sigmund J. Haidacher
Sigmund J. Haidacher
Kathleen M. Hoch
Kathleen M. Hoch
Meghna Bajaj
Jennifer K. Spinler
Jennifer K. Spinler
Anthony M. Haag
Anthony M. Haag
Shelly A. Buffington
Melinda A. Engevik
Unraveling the Metabolic Requirements of the Gut Commensal Bacteroides ovatus
description Background: Bacteroidetes are the most common bacterial phylum in the mammalian intestine and the effects of several Bacteroides spp. on multiple facets of host physiology have been previously described. Of the Bacteroides spp., Bacteroides ovatus has recently garnered attention due to its beneficial effects in the context of intestinal inflammation. In this study, we aimed to examine model host intestinal physiological conditions and dietary modifications to characterize their effects on B. ovatus growth.Methods and Results: Using Biolog phenotypic microarrays, we evaluated 62 primary carbon sources and determined that B. ovatus ATCC 8384 can use the following carbohydrates as primary carbon sources: 10 disaccharides, 4 trisaccharides, 4 polysaccharides, 4 polymers, 3 L-linked sugars, 6 D-linked sugars, 5 amino-sugars, 6 alcohol sugars, and 15 organic acids. Proteomic profiling of B. ovatus bacteria revealed that a significant portion of the B. ovatus proteome contains proteins important for metabolism. Among the proteins, we found glycosyl hydrolase (GH) familes GH2, GH5, GH20, GH 43, GH88, GH92, and GH95. We also identified multiple proteins with antioxidant properties and reasoned that these proteins may support B. ovatus growth in the GI tract. Upon further testing, we showed that B. ovatus grew robustly in various pH, osmolarity, bile, ethanol, and H2O2 concentrations; indicating that B. ovatus is a well-adapted gut microbe.Conclusion: Taken together, we have demonstrated that key host and diet-derived changes in the intestinal environment influence B. ovatus growth. These data provide the framework for future work toward understanding how diet and lifestyle interventions may promote a beneficial environment for B. ovatus growth.
format article
author Robert Fultz
Taylor Ticer
Faith D. Ihekweazu
Faith D. Ihekweazu
Thomas D. Horvath
Thomas D. Horvath
Sigmund J. Haidacher
Sigmund J. Haidacher
Kathleen M. Hoch
Kathleen M. Hoch
Meghna Bajaj
Jennifer K. Spinler
Jennifer K. Spinler
Anthony M. Haag
Anthony M. Haag
Shelly A. Buffington
Melinda A. Engevik
author_facet Robert Fultz
Taylor Ticer
Faith D. Ihekweazu
Faith D. Ihekweazu
Thomas D. Horvath
Thomas D. Horvath
Sigmund J. Haidacher
Sigmund J. Haidacher
Kathleen M. Hoch
Kathleen M. Hoch
Meghna Bajaj
Jennifer K. Spinler
Jennifer K. Spinler
Anthony M. Haag
Anthony M. Haag
Shelly A. Buffington
Melinda A. Engevik
author_sort Robert Fultz
title Unraveling the Metabolic Requirements of the Gut Commensal Bacteroides ovatus
title_short Unraveling the Metabolic Requirements of the Gut Commensal Bacteroides ovatus
title_full Unraveling the Metabolic Requirements of the Gut Commensal Bacteroides ovatus
title_fullStr Unraveling the Metabolic Requirements of the Gut Commensal Bacteroides ovatus
title_full_unstemmed Unraveling the Metabolic Requirements of the Gut Commensal Bacteroides ovatus
title_sort unraveling the metabolic requirements of the gut commensal bacteroides ovatus
publisher Frontiers Media S.A.
publishDate 2021
url https://doaj.org/article/3f81ecd7e8bc48e2bb3e0901f01bfe38
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