Comparative survey of the relative impact of mRNA features on local ribosome profiling read density

Ribosome profiling data can suffer from uneven coverage which hampers estimation of elongation rates. Connor et al.present an enhanced data smoothing method for Ribo-seq data and highlight significant variability in sequence determinants of ribosome density in publicly available data sets.

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Autores principales:	Patrick B. F. O’Connor, Dmitry E. Andreev, Pavel V. Baranov
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2016
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/42f88ac9182b471484c206f16074bb5e
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spelling	oai:doaj.org-article:42f88ac9182b471484c206f16074bb5e2021-12-02T16:56:46ZComparative survey of the relative impact of mRNA features on local ribosome profiling read density10.1038/ncomms129152041-1723https://doaj.org/article/42f88ac9182b471484c206f16074bb5e2016-10-01T00:00:00Zhttps://doi.org/10.1038/ncomms12915https://doaj.org/toc/2041-1723Ribosome profiling data can suffer from uneven coverage which hampers estimation of elongation rates. Connor et al.present an enhanced data smoothing method for Ribo-seq data and highlight significant variability in sequence determinants of ribosome density in publicly available data sets.Patrick B. F. O’ConnorDmitry E. AndreevPavel V. BaranovNature PortfolioarticleScienceQENNature Communications, Vol 7, Iss 1, Pp 1-12 (2016)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Patrick B. F. O’Connor Dmitry E. Andreev Pavel V. Baranov Comparative survey of the relative impact of mRNA features on local ribosome profiling read density
description	Ribosome profiling data can suffer from uneven coverage which hampers estimation of elongation rates. Connor et al.present an enhanced data smoothing method for Ribo-seq data and highlight significant variability in sequence determinants of ribosome density in publicly available data sets.
format	article
author	Patrick B. F. O’Connor Dmitry E. Andreev Pavel V. Baranov
author_facet	Patrick B. F. O’Connor Dmitry E. Andreev Pavel V. Baranov
author_sort	Patrick B. F. O’Connor
title	Comparative survey of the relative impact of mRNA features on local ribosome profiling read density
title_short	Comparative survey of the relative impact of mRNA features on local ribosome profiling read density
title_full	Comparative survey of the relative impact of mRNA features on local ribosome profiling read density
title_fullStr	Comparative survey of the relative impact of mRNA features on local ribosome profiling read density
title_full_unstemmed	Comparative survey of the relative impact of mRNA features on local ribosome profiling read density
title_sort	comparative survey of the relative impact of mrna features on local ribosome profiling read density
publisher	Nature Portfolio
publishDate	2016
url	https://doaj.org/article/42f88ac9182b471484c206f16074bb5e
work_keys_str_mv	AT patrickbfoconnor comparativesurveyoftherelativeimpactofmrnafeaturesonlocalribosomeprofilingreaddensity AT dmitryeandreev comparativesurveyoftherelativeimpactofmrnafeaturesonlocalribosomeprofilingreaddensity AT pavelvbaranov comparativesurveyoftherelativeimpactofmrnafeaturesonlocalribosomeprofilingreaddensity
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Comparative survey of the relative impact of mRNA features on local ribosome profiling read density

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