Identification of a Natural Viral RNA Motif That Optimizes Sensing of Viral RNA by RIG-I

ABSTRACT Stimulation of the antiviral response depends on the sensing of viral pathogen-associated molecular patterns (PAMPs) by specialized cellular proteins. During infection with RNA viruses, 5′-di- or -triphosphates accompanying specific single or double-stranded RNA motifs trigger signaling of...

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Autores principales: Jie Xu, Xiomara Mercado-López, Jennifer T. Grier, Won-keun Kim, Lauren F. Chun, Edward B. Irvine, Yoandris Del Toro Duany, Alison Kell, Sun Hur, Michael Gale, Arjun Raj, Carolina B. López
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Publicado: American Society for Microbiology 2015
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spelling oai:doaj.org-article:44e61581f5e346218856bd25e4a589912021-11-15T15:41:30ZIdentification of a Natural Viral RNA Motif That Optimizes Sensing of Viral RNA by RIG-I10.1128/mBio.01265-152150-7511https://doaj.org/article/44e61581f5e346218856bd25e4a589912015-10-01T00:00:00Zhttps://journals.asm.org/doi/10.1128/mBio.01265-15https://doaj.org/toc/2150-7511ABSTRACT Stimulation of the antiviral response depends on the sensing of viral pathogen-associated molecular patterns (PAMPs) by specialized cellular proteins. During infection with RNA viruses, 5′-di- or -triphosphates accompanying specific single or double-stranded RNA motifs trigger signaling of intracellular RIG-I-like receptors (RLRs) and initiate the antiviral response. Although these molecular signatures are present during the replication of many viruses, it is unknown whether they are sufficient for strong activation of RLRs during infection. Immunostimulatory defective viral genomes (iDVGs) from Sendai virus (SeV) are among the most potent natural viral triggers of antiviral immunity. Here we describe an RNA motif (DVG70-114) that is essential for the potent immunostimulatory activity of 5′-triphosphate-containing SeV iDVGs. DVG70-114 enhances viral sensing by the host cell independently of the long stretches of complementary RNA flanking the iDVGs, and it retains its stimulatory potential when transferred to otherwise inert viral RNA. In vitro analysis showed that DVG70-114 augments the binding of RIG-I to viral RNA and promotes enhanced RIG-I polymerization, thereby facilitating the onset of the antiviral response. Together, our results define a new natural viral PAMP enhancer motif that promotes viral recognition by RLRs and confers potent immunostimulatory activity to viral RNA. IMPORTANCE A discrete group of molecular motifs, including 5′-triphosphates associated with double-stranded RNA, have been identified as essential for the triggering of antiviral immunity. Most RNA viruses expose these motifs during their replication; however, successful viruses normally evade immune recognition and replicate to high levels before detection, indicating that unknown factors drive antiviral immunity. DVGs from SeV are among the most potent natural viral stimuli of the antiviral response known to date. These studies define a new natural viral motif present in DVGs that maximizes viral recognition by the intracellular sensor RIG-I, allowing fast and strong antiviral responses even in the presence of viral-encoded immune antagonists. This motif can be harnessed to increase the immunostimulatory potential of otherwise inert viral RNAs and represents a novel immunostimulatory enhancer that could be used in the development of vaccine adjuvants and antivirals.Jie XuXiomara Mercado-LópezJennifer T. GrierWon-keun KimLauren F. ChunEdward B. IrvineYoandris Del Toro DuanyAlison KellSun HurMichael GaleArjun RajCarolina B. LópezAmerican Society for MicrobiologyarticleMicrobiologyQR1-502ENmBio, Vol 6, Iss 5 (2015)
institution DOAJ
collection DOAJ
language EN
topic Microbiology
QR1-502
spellingShingle Microbiology
QR1-502
Jie Xu
Xiomara Mercado-López
Jennifer T. Grier
Won-keun Kim
Lauren F. Chun
Edward B. Irvine
Yoandris Del Toro Duany
Alison Kell
Sun Hur
Michael Gale
Arjun Raj
Carolina B. López
Identification of a Natural Viral RNA Motif That Optimizes Sensing of Viral RNA by RIG-I
description ABSTRACT Stimulation of the antiviral response depends on the sensing of viral pathogen-associated molecular patterns (PAMPs) by specialized cellular proteins. During infection with RNA viruses, 5′-di- or -triphosphates accompanying specific single or double-stranded RNA motifs trigger signaling of intracellular RIG-I-like receptors (RLRs) and initiate the antiviral response. Although these molecular signatures are present during the replication of many viruses, it is unknown whether they are sufficient for strong activation of RLRs during infection. Immunostimulatory defective viral genomes (iDVGs) from Sendai virus (SeV) are among the most potent natural viral triggers of antiviral immunity. Here we describe an RNA motif (DVG70-114) that is essential for the potent immunostimulatory activity of 5′-triphosphate-containing SeV iDVGs. DVG70-114 enhances viral sensing by the host cell independently of the long stretches of complementary RNA flanking the iDVGs, and it retains its stimulatory potential when transferred to otherwise inert viral RNA. In vitro analysis showed that DVG70-114 augments the binding of RIG-I to viral RNA and promotes enhanced RIG-I polymerization, thereby facilitating the onset of the antiviral response. Together, our results define a new natural viral PAMP enhancer motif that promotes viral recognition by RLRs and confers potent immunostimulatory activity to viral RNA. IMPORTANCE A discrete group of molecular motifs, including 5′-triphosphates associated with double-stranded RNA, have been identified as essential for the triggering of antiviral immunity. Most RNA viruses expose these motifs during their replication; however, successful viruses normally evade immune recognition and replicate to high levels before detection, indicating that unknown factors drive antiviral immunity. DVGs from SeV are among the most potent natural viral stimuli of the antiviral response known to date. These studies define a new natural viral motif present in DVGs that maximizes viral recognition by the intracellular sensor RIG-I, allowing fast and strong antiviral responses even in the presence of viral-encoded immune antagonists. This motif can be harnessed to increase the immunostimulatory potential of otherwise inert viral RNAs and represents a novel immunostimulatory enhancer that could be used in the development of vaccine adjuvants and antivirals.
format article
author Jie Xu
Xiomara Mercado-López
Jennifer T. Grier
Won-keun Kim
Lauren F. Chun
Edward B. Irvine
Yoandris Del Toro Duany
Alison Kell
Sun Hur
Michael Gale
Arjun Raj
Carolina B. López
author_facet Jie Xu
Xiomara Mercado-López
Jennifer T. Grier
Won-keun Kim
Lauren F. Chun
Edward B. Irvine
Yoandris Del Toro Duany
Alison Kell
Sun Hur
Michael Gale
Arjun Raj
Carolina B. López
author_sort Jie Xu
title Identification of a Natural Viral RNA Motif That Optimizes Sensing of Viral RNA by RIG-I
title_short Identification of a Natural Viral RNA Motif That Optimizes Sensing of Viral RNA by RIG-I
title_full Identification of a Natural Viral RNA Motif That Optimizes Sensing of Viral RNA by RIG-I
title_fullStr Identification of a Natural Viral RNA Motif That Optimizes Sensing of Viral RNA by RIG-I
title_full_unstemmed Identification of a Natural Viral RNA Motif That Optimizes Sensing of Viral RNA by RIG-I
title_sort identification of a natural viral rna motif that optimizes sensing of viral rna by rig-i
publisher American Society for Microbiology
publishDate 2015
url https://doaj.org/article/44e61581f5e346218856bd25e4a58991
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