Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease

Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in plan...

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Autores principales:	Crissy Massimino, Chad Vosburg, Teresa Shippy, Prashant S. Hosmani, Mirella Flores-Gonzalez, Lukas A. Mueller, Wayne B. Hunter, Joshua B. Benoit, Susan J. Brown, Tom D’Elia, Surya Saha
Formato:	article
Lenguaje:	EN
Publicado:	GigaScience Press 2021
Materias:	Electronic computers. Computer science QA75.5-76.95
Acceso en línea:	https://doaj.org/article/47714ec388d7439088fd46f38017da92
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spelling	oai:doaj.org-article:47714ec388d7439088fd46f38017da922021-12-02T18:24:21ZAnnotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease2709-47152709-471510.46471/gigabyte.20https://doaj.org/article/47714ec388d7439088fd46f38017da922021-05-01T00:00:00Zhttps://gigabytejournal.com/20https://doaj.org/toc/2709-4715https://doaj.org/toc/2709-4715Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in planta treatments for CLas. Therefore, one strategy is to manage the psyllid population. Manual annotation of the D. citri genome can identify and characterize gene families that could be novel targets for psyllid control. The yellow gene family is an excellent target because yellow genes, which have roles in melanization, are linked to development and immunity. Combined analysis of the genome with RNA-seq datasets, sequence homology, and phylogenetic trees were used to identify and annotate nine yellow genes in the D. citri genome. Manual curation of genes in D. citri provided in-depth analysis of the yellow family among hemipteran insects and provides new targets for molecular control of this psyllid pest. Manual annotation was done as part of a collaborative Citrus Greening community annotation project.Crissy MassiminoChad VosburgTeresa ShippyPrashant S. HosmaniMirella Flores-GonzalezLukas A. MuellerWayne B. HunterJoshua B. BenoitSusan J. BrownTom D’EliaSurya SahaGigaScience PressarticleElectronic computers. Computer scienceQA75.5-76.95ENGigaByte, Vol 2021, Pp 1-15 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Electronic computers. Computer science QA75.5-76.95
spellingShingle	Electronic computers. Computer science QA75.5-76.95 Crissy Massimino Chad Vosburg Teresa Shippy Prashant S. Hosmani Mirella Flores-Gonzalez Lukas A. Mueller Wayne B. Hunter Joshua B. Benoit Susan J. Brown Tom D’Elia Surya Saha Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
description	Huanglongbing (HLB), also known as citrus greening disease, is caused by the bacterium Candidatus Liberibacter asiaticus (CLas). It is a serious threat to global citrus production. This bacterium is transmitted by the Asian citrus psyllid, Diaphorina citri (Hemiptera). There are no effective in planta treatments for CLas. Therefore, one strategy is to manage the psyllid population. Manual annotation of the D. citri genome can identify and characterize gene families that could be novel targets for psyllid control. The yellow gene family is an excellent target because yellow genes, which have roles in melanization, are linked to development and immunity. Combined analysis of the genome with RNA-seq datasets, sequence homology, and phylogenetic trees were used to identify and annotate nine yellow genes in the D. citri genome. Manual curation of genes in D. citri provided in-depth analysis of the yellow family among hemipteran insects and provides new targets for molecular control of this psyllid pest. Manual annotation was done as part of a collaborative Citrus Greening community annotation project.
format	article
author	Crissy Massimino Chad Vosburg Teresa Shippy Prashant S. Hosmani Mirella Flores-Gonzalez Lukas A. Mueller Wayne B. Hunter Joshua B. Benoit Susan J. Brown Tom D’Elia Surya Saha
author_facet	Crissy Massimino Chad Vosburg Teresa Shippy Prashant S. Hosmani Mirella Flores-Gonzalez Lukas A. Mueller Wayne B. Hunter Joshua B. Benoit Susan J. Brown Tom D’Elia Surya Saha
author_sort	Crissy Massimino
title	Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_short	Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_full	Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_fullStr	Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_full_unstemmed	Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
title_sort	annotation of yellow genes in diaphorina citri, the vector for huanglongbing disease
publisher	GigaScience Press
publishDate	2021
url	https://doaj.org/article/47714ec388d7439088fd46f38017da92
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Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease

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