METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses

We developed a novel tool, i.e., METAnnotatorX2, that includes a number of new advanced features for analysis of deep and shallow metagenomic data sets and is accompanied by (regularly updated) customized databases for archaea, bacteria, fungi, protists, and viruses. Both software and databases wer...

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Autores principales:	Christian Milani, Gabriele Andrea Lugli, Federico Fontana, Leonardo Mancabelli, Giulia Alessandri, Giulia Longhi, Rosaria Anzalone, Alice Viappiani, Francesca Turroni, Douwe van Sinderen, Marco Ventura
Formato:	article
Lenguaje:	EN
Publicado:	American Society for Microbiology 2021
Materias:	Microbiology QR1-502
Acceso en línea:	https://doaj.org/article/494decb9870c40139e2a9c459f46f2e2
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spelling	oai:doaj.org-article:494decb9870c40139e2a9c459f46f2e22021-12-02T17:42:44ZMETAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses2379-507710.1128/mSystems.00583-21https://doaj.org/article/494decb9870c40139e2a9c459f46f2e22021-06-01T00:00:00Zhttps://journals.asm.org/doi/10.1128/mSystems.00583-21https://doaj.org/toc/2379-5077 We developed a novel tool, i.e., METAnnotatorX2, that includes a number of new advanced features for analysis of deep and shallow metagenomic data sets and is accompanied by (regularly updated) customized databases for archaea, bacteria, fungi, protists, and viruses. Both software and databases were developed so as to maximize sensitivity and specificity while including support for shallow metagenomic data sets.Christian MilaniGabriele Andrea LugliFederico FontanaLeonardo MancabelliGiulia AlessandriGiulia LonghiRosaria AnzaloneAlice ViappianiFrancesca TurroniDouwe van SinderenMarco VenturaAmerican Society for MicrobiologyarticleMicrobiologyQR1-502ENmSystems, Vol 6, Iss 3 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Microbiology QR1-502
spellingShingle	Microbiology QR1-502 Christian Milani Gabriele Andrea Lugli Federico Fontana Leonardo Mancabelli Giulia Alessandri Giulia Longhi Rosaria Anzalone Alice Viappiani Francesca Turroni Douwe van Sinderen Marco Ventura METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses
description	We developed a novel tool, i.e., METAnnotatorX2, that includes a number of new advanced features for analysis of deep and shallow metagenomic data sets and is accompanied by (regularly updated) customized databases for archaea, bacteria, fungi, protists, and viruses. Both software and databases were developed so as to maximize sensitivity and specificity while including support for shallow metagenomic data sets.
format	article
author	Christian Milani Gabriele Andrea Lugli Federico Fontana Leonardo Mancabelli Giulia Alessandri Giulia Longhi Rosaria Anzalone Alice Viappiani Francesca Turroni Douwe van Sinderen Marco Ventura
author_facet	Christian Milani Gabriele Andrea Lugli Federico Fontana Leonardo Mancabelli Giulia Alessandri Giulia Longhi Rosaria Anzalone Alice Viappiani Francesca Turroni Douwe van Sinderen Marco Ventura
author_sort	Christian Milani
title	METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses
title_short	METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses
title_full	METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses
title_fullStr	METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses
title_full_unstemmed	METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses
title_sort	metannotatorx2: a comprehensive tool for deep and shallow metagenomic data set analyses
publisher	American Society for Microbiology
publishDate	2021
url	https://doaj.org/article/494decb9870c40139e2a9c459f46f2e2
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METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses

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