Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis

Abstract. Qiptiyah M, Pudyatmoko S, Widyatmoko AYPBC, Nurtjahjaningsih ILG, Imron MA. 2019. Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis. Biodiversitas 20: 3352-3357. Two of three subspecies of banteng (B. javanicus) can be fo...

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Autores principales:	Maryatul Qiptiyah, Satyawan Pudyatmoko, AYPBC Widyatmoko, ILG NURTJAHJANINGSIH, MUHAMMAD ALI IMRON
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2019
Materias:	bovidae, cytochrome b, d-loop, javan banteng Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/4d5b3a12676c4eb8b6dcbe25961fca6f
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spelling	oai:doaj.org-article:4d5b3a12676c4eb8b6dcbe25961fca6f2021-11-21T21:57:24ZPhylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis1412-033X2085-472210.13057/biodiv/d201131https://doaj.org/article/4d5b3a12676c4eb8b6dcbe25961fca6f2019-10-01T00:00:00Zhttps://smujo.id/biodiv/article/view/4374https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Abstract. Qiptiyah M, Pudyatmoko S, Widyatmoko AYPBC, Nurtjahjaningsih ILG, Imron MA. 2019. Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis. Biodiversitas 20: 3352-3357. Two of three subspecies of banteng (B. javanicus) can be found in Indonesia, namely B. j. lowi and B. j. javanicus. The taxonomic assignment of the two subspecies is still in the discussion researchers currently. One of the reproductive characters of members the Bovidae family, including the banteng, is known to have interbreeding ability between species and can produce fertile offspring. In some places, there exist grazing cattle near or in the banteng’s natural habitat. This phenomenon aimed to provide banteng mates with cows, which later they will breed high-quality offsprings. Regarding interbreeding capability, this condition can be a threat to the genetic purity of wild banteng. The main objectives of this study were to identify the phylogenetic position of Javan banteng from conservation areas in Java in relation to the other taxon and detect their genetic purity. We analyzed 28 cytochrome b and d-loop region sequences of Javan banteng from feces materials of four conservation areas (Ujung Kulon National Park, Alas Purwo National Park, Meru Betiri National Park, and Baluran National Park). We compared our data with reference sequences data of the other Bovidae species and Capra hircus as outgroup. The reference data was taken from NCBI, and they were analyzed using maximum likelihood. The results showed that Javan banteng was in a different group from other taxa. Separation of subspecies B. j. javanicus and B. j. lowi occurred circa 1.25 mya. The results from this study suggested that there is no indication of genetic introgression between Javan banteng and the (domesticated) cattle.Maryatul QiptiyahSatyawan PudyatmokoAYPBC WidyatmokoILG NURTJAHJANINGSIHMUHAMMAD ALI IMRONMBI & UNS Soloarticlebovidae, cytochrome b, d-loop, javan bantengBiology (General)QH301-705.5ENBiodiversitas, Vol 20, Iss 11 (2019)
institution	DOAJ
collection	DOAJ
language	EN
topic	bovidae, cytochrome b, d-loop, javan banteng Biology (General) QH301-705.5
spellingShingle	bovidae, cytochrome b, d-loop, javan banteng Biology (General) QH301-705.5 Maryatul Qiptiyah Satyawan Pudyatmoko AYPBC Widyatmoko ILG NURTJAHJANINGSIH MUHAMMAD ALI IMRON Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis
description	Abstract. Qiptiyah M, Pudyatmoko S, Widyatmoko AYPBC, Nurtjahjaningsih ILG, Imron MA. 2019. Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis. Biodiversitas 20: 3352-3357. Two of three subspecies of banteng (B. javanicus) can be found in Indonesia, namely B. j. lowi and B. j. javanicus. The taxonomic assignment of the two subspecies is still in the discussion researchers currently. One of the reproductive characters of members the Bovidae family, including the banteng, is known to have interbreeding ability between species and can produce fertile offspring. In some places, there exist grazing cattle near or in the banteng’s natural habitat. This phenomenon aimed to provide banteng mates with cows, which later they will breed high-quality offsprings. Regarding interbreeding capability, this condition can be a threat to the genetic purity of wild banteng. The main objectives of this study were to identify the phylogenetic position of Javan banteng from conservation areas in Java in relation to the other taxon and detect their genetic purity. We analyzed 28 cytochrome b and d-loop region sequences of Javan banteng from feces materials of four conservation areas (Ujung Kulon National Park, Alas Purwo National Park, Meru Betiri National Park, and Baluran National Park). We compared our data with reference sequences data of the other Bovidae species and Capra hircus as outgroup. The reference data was taken from NCBI, and they were analyzed using maximum likelihood. The results showed that Javan banteng was in a different group from other taxa. Separation of subspecies B. j. javanicus and B. j. lowi occurred circa 1.25 mya. The results from this study suggested that there is no indication of genetic introgression between Javan banteng and the (domesticated) cattle.
format	article
author	Maryatul Qiptiyah Satyawan Pudyatmoko AYPBC Widyatmoko ILG NURTJAHJANINGSIH MUHAMMAD ALI IMRON
author_facet	Maryatul Qiptiyah Satyawan Pudyatmoko AYPBC Widyatmoko ILG NURTJAHJANINGSIH MUHAMMAD ALI IMRON
author_sort	Maryatul Qiptiyah
title	Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis
title_short	Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis
title_full	Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis
title_fullStr	Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis
title_full_unstemmed	Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis
title_sort	phylogenetic position of javan banteng (bos javanicus javanicus) from conservation area in java base on mtdna analysis
publisher	MBI & UNS Solo
publishDate	2019
url	https://doaj.org/article/4d5b3a12676c4eb8b6dcbe25961fca6f
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Phylogenetic position of Javan banteng (Bos javanicus javanicus) from conservation area in Java base on mtDNA analysis

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