Metagenome Proteins and Database Contamination

ABSTRACT Continued influx of metagenome-derived proteins with misannotated taxonomy into conventional databases, including RefSeq, threatens to eliminate the value of taxonomy identifiers. To prevent this, urgent efforts should be undertaken by submitters of metagenomic data sets as well as by datab...

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Autor principal:	Irina R. Arkhipova
Formato:	article
Lenguaje:	EN
Publicado:	American Society for Microbiology 2020
Materias:	MAG RefSeq binning classification metagenomics taxonomy Microbiology QR1-502
Acceso en línea:	https://doaj.org/article/508685c8200644ed90da2b8a279b33e7
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spelling	oai:doaj.org-article:508685c8200644ed90da2b8a279b33e72021-11-15T15:31:13ZMetagenome Proteins and Database Contamination10.1128/mSphere.00854-202379-5042https://doaj.org/article/508685c8200644ed90da2b8a279b33e72020-12-01T00:00:00Zhttps://journals.asm.org/doi/10.1128/mSphere.00854-20https://doaj.org/toc/2379-5042ABSTRACT Continued influx of metagenome-derived proteins with misannotated taxonomy into conventional databases, including RefSeq, threatens to eliminate the value of taxonomy identifiers. To prevent this, urgent efforts should be undertaken by submitters of metagenomic data sets as well as by database managers.Irina R. ArkhipovaAmerican Society for MicrobiologyarticleMAGRefSeqbinningclassificationmetagenomicstaxonomyMicrobiologyQR1-502ENmSphere, Vol 5, Iss 6 (2020)
institution	DOAJ
collection	DOAJ
language	EN
topic	MAG RefSeq binning classification metagenomics taxonomy Microbiology QR1-502
spellingShingle	MAG RefSeq binning classification metagenomics taxonomy Microbiology QR1-502 Irina R. Arkhipova Metagenome Proteins and Database Contamination
description	ABSTRACT Continued influx of metagenome-derived proteins with misannotated taxonomy into conventional databases, including RefSeq, threatens to eliminate the value of taxonomy identifiers. To prevent this, urgent efforts should be undertaken by submitters of metagenomic data sets as well as by database managers.
format	article
author	Irina R. Arkhipova
author_facet	Irina R. Arkhipova
author_sort	Irina R. Arkhipova
title	Metagenome Proteins and Database Contamination
title_short	Metagenome Proteins and Database Contamination
title_full	Metagenome Proteins and Database Contamination
title_fullStr	Metagenome Proteins and Database Contamination
title_full_unstemmed	Metagenome Proteins and Database Contamination
title_sort	metagenome proteins and database contamination
publisher	American Society for Microbiology
publishDate	2020
url	https://doaj.org/article/508685c8200644ed90da2b8a279b33e7
work_keys_str_mv	AT irinararkhipova metagenomeproteinsanddatabasecontamination
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Metagenome Proteins and Database Contamination

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