Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia

Abstract Here, we describe taxonomical composition, as well as seasonal and diel dynamics of airborne microbial communities in West Siberia. A total of 78 airborne biomass samples from 39 time intervals were analysed, within a temperature range of 48 °C (26 °C to − 22 °C). We observed a 5–170-fold d...

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Autores principales:	Elena S. Gusareva, Nicolas P. E. Gaultier, Balakrishnan N. V. Premkrishnan, Carmon Kee, Serene Boon Yuean Lim, Cassie E. Heinle, Rikky W. Purbojati, Ang Poh Nee, Sachin R. Lohar, Koh Yanqing, Vladimir N. Kharkov, Daniela I. Drautz-Moses, Vadim A. Stepanov, Stephan C. Schuster
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2020
Materias:	Medicine R Science Q
Acceso en línea:	https://doaj.org/article/52475bb41c0b45cc99b71647099821f4
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spelling	oai:doaj.org-article:52475bb41c0b45cc99b71647099821f42021-12-02T12:33:04ZTaxonomic composition and seasonal dynamics of the air microbiome in West Siberia10.1038/s41598-020-78604-82045-2322https://doaj.org/article/52475bb41c0b45cc99b71647099821f42020-12-01T00:00:00Zhttps://doi.org/10.1038/s41598-020-78604-8https://doaj.org/toc/2045-2322Abstract Here, we describe taxonomical composition, as well as seasonal and diel dynamics of airborne microbial communities in West Siberia. A total of 78 airborne biomass samples from 39 time intervals were analysed, within a temperature range of 48 °C (26 °C to − 22 °C). We observed a 5–170-fold decrease in DNA yield extracted from the airborne biomass in winter compared to summer, nevertheless, yielding sufficient material for metagenomic analysis. The airborne microbial communities included Actinobacteria and Proteobacteria, Ascomycota and Basidiomycota fungi as major components, as well as some Streptophyta plants. In summer, bacterial and fungal plant pathogens, and wood-rotting saprophytes were predominant. In winter, Ascomycota moulds and cold-related or stress environment bacterial species were enriched, while the fraction of wood-rotting and mushroom-forming Basidiomycota fungi was largely reduced. As recently reported for the tropical climate, the airborne microbial communities performed a diel cycle in summer, however, in winter diel dynamics were not observed.Elena S. GusarevaNicolas P. E. GaultierBalakrishnan N. V. PremkrishnanCarmon KeeSerene Boon Yuean LimCassie E. HeinleRikky W. PurbojatiAng Poh NeeSachin R. LoharKoh YanqingVladimir N. KharkovDaniela I. Drautz-MosesVadim A. StepanovStephan C. SchusterNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 10, Iss 1, Pp 1-7 (2020)
institution	DOAJ
collection	DOAJ
language	EN
topic	Medicine R Science Q
spellingShingle	Medicine R Science Q Elena S. Gusareva Nicolas P. E. Gaultier Balakrishnan N. V. Premkrishnan Carmon Kee Serene Boon Yuean Lim Cassie E. Heinle Rikky W. Purbojati Ang Poh Nee Sachin R. Lohar Koh Yanqing Vladimir N. Kharkov Daniela I. Drautz-Moses Vadim A. Stepanov Stephan C. Schuster Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia
description	Abstract Here, we describe taxonomical composition, as well as seasonal and diel dynamics of airborne microbial communities in West Siberia. A total of 78 airborne biomass samples from 39 time intervals were analysed, within a temperature range of 48 °C (26 °C to − 22 °C). We observed a 5–170-fold decrease in DNA yield extracted from the airborne biomass in winter compared to summer, nevertheless, yielding sufficient material for metagenomic analysis. The airborne microbial communities included Actinobacteria and Proteobacteria, Ascomycota and Basidiomycota fungi as major components, as well as some Streptophyta plants. In summer, bacterial and fungal plant pathogens, and wood-rotting saprophytes were predominant. In winter, Ascomycota moulds and cold-related or stress environment bacterial species were enriched, while the fraction of wood-rotting and mushroom-forming Basidiomycota fungi was largely reduced. As recently reported for the tropical climate, the airborne microbial communities performed a diel cycle in summer, however, in winter diel dynamics were not observed.
format	article
author	Elena S. Gusareva Nicolas P. E. Gaultier Balakrishnan N. V. Premkrishnan Carmon Kee Serene Boon Yuean Lim Cassie E. Heinle Rikky W. Purbojati Ang Poh Nee Sachin R. Lohar Koh Yanqing Vladimir N. Kharkov Daniela I. Drautz-Moses Vadim A. Stepanov Stephan C. Schuster
author_facet	Elena S. Gusareva Nicolas P. E. Gaultier Balakrishnan N. V. Premkrishnan Carmon Kee Serene Boon Yuean Lim Cassie E. Heinle Rikky W. Purbojati Ang Poh Nee Sachin R. Lohar Koh Yanqing Vladimir N. Kharkov Daniela I. Drautz-Moses Vadim A. Stepanov Stephan C. Schuster
author_sort	Elena S. Gusareva
title	Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia
title_short	Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia
title_full	Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia
title_fullStr	Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia
title_full_unstemmed	Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia
title_sort	taxonomic composition and seasonal dynamics of the air microbiome in west siberia
publisher	Nature Portfolio
publishDate	2020
url	https://doaj.org/article/52475bb41c0b45cc99b71647099821f4
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Taxonomic composition and seasonal dynamics of the air microbiome in West Siberia

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