Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia

Abstract. Retnowati D, Solihin DD, Ghulamahdi M, Lestari. 2021. Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia. Biodiversitas 22: 3702-3708. Sponges are sessile benthic filter-feeding animals,...

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Autores principales:	DWI RETNOWATI, DEDY DURYADI SOLIHIN, MUNIF GHULAMAHDI, YULIN LESTARI
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2021
Materias:	callyspongia sp., metagenomic approach, sponge-associated actinobacteria. Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/5256650ccea542968415c6d12fa85250
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spelling	oai:doaj.org-article:5256650ccea542968415c6d12fa852502021-11-22T12:18:55ZNext-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia1412-033X2085-472210.13057/biodiv/d220913https://doaj.org/article/5256650ccea542968415c6d12fa852502021-08-01T00:00:00Zhttps://smujo.id/biodiv/article/view/8771https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Abstract. Retnowati D, Solihin DD, Ghulamahdi M, Lestari. 2021. Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia. Biodiversitas 22: 3702-3708. Sponges are sessile benthic filter-feeding animals, which harbor numerous microbes. The enormous community and abundance of sponge-associated actinobacteria envisage sponges as hot spots of microbes. The metagenomic approach with Next Generation Sequencing (NGS) technology was used to investigate the actinobacteria community of Callyspongia sp. collected from Kepulauan Seribu Marine National Park, Indonesia. Fourteen actinobacteria families were found associated with the sponge. Among them, Microbacteriaceae was the most dominant family. The community of actinobacteria was higher than that of the culturable method from our previous study. The research showed that a metagenomic approach using NGS technology reveals better information regarding the actinobacteria community associated with Callyspongia sp.DWI RETNOWATIDEDY DURYADI SOLIHINMUNIF GHULAMAHDIYULIN LESTARIMBI & UNS Soloarticlecallyspongia sp., metagenomic approach, sponge-associated actinobacteria.Biology (General)QH301-705.5ENBiodiversitas, Vol 22, Iss 9 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	callyspongia sp., metagenomic approach, sponge-associated actinobacteria. Biology (General) QH301-705.5
spellingShingle	callyspongia sp., metagenomic approach, sponge-associated actinobacteria. Biology (General) QH301-705.5 DWI RETNOWATI DEDY DURYADI SOLIHIN MUNIF GHULAMAHDI YULIN LESTARI Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia
description	Abstract. Retnowati D, Solihin DD, Ghulamahdi M, Lestari. 2021. Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia. Biodiversitas 22: 3702-3708. Sponges are sessile benthic filter-feeding animals, which harbor numerous microbes. The enormous community and abundance of sponge-associated actinobacteria envisage sponges as hot spots of microbes. The metagenomic approach with Next Generation Sequencing (NGS) technology was used to investigate the actinobacteria community of Callyspongia sp. collected from Kepulauan Seribu Marine National Park, Indonesia. Fourteen actinobacteria families were found associated with the sponge. Among them, Microbacteriaceae was the most dominant family. The community of actinobacteria was higher than that of the culturable method from our previous study. The research showed that a metagenomic approach using NGS technology reveals better information regarding the actinobacteria community associated with Callyspongia sp.
format	article
author	DWI RETNOWATI DEDY DURYADI SOLIHIN MUNIF GHULAMAHDI YULIN LESTARI
author_facet	DWI RETNOWATI DEDY DURYADI SOLIHIN MUNIF GHULAMAHDI YULIN LESTARI
author_sort	DWI RETNOWATI
title	Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia
title_short	Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia
title_full	Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia
title_fullStr	Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia
title_full_unstemmed	Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia
title_sort	next-generation sequencing-based actinobacteria community associated with callyspongia sp. from kepulauan seribu marine national park, jakarta, indonesia
publisher	MBI & UNS Solo
publishDate	2021
url	https://doaj.org/article/5256650ccea542968415c6d12fa85250
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Next-generation sequencing-based Actinobacteria community associated with Callyspongia sp. from Kepulauan Seribu Marine National Park, Jakarta, Indonesia

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