A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies
With the development of large scale single cell RNA-seq technology, population-scale scRNA-seq studies are emerging. Here, the authors develop BAMM-SC, a tool for clustering droplet-based scRNA-seq data from multiple individuals simultaneously.
Guardado en:
| Autores principales: | , , , , , , , , , , , , , , |
|---|---|
| Formato: | article |
| Lenguaje: | EN |
| Publicado: |
Nature Portfolio
2019
|
| Materias: | |
| Acceso en línea: | https://doaj.org/article/52d49e5908374e5ea58127ece365e62a |
| Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
| id |
oai:doaj.org-article:52d49e5908374e5ea58127ece365e62a |
|---|---|
| record_format |
dspace |
| spelling |
oai:doaj.org-article:52d49e5908374e5ea58127ece365e62a2021-12-02T14:38:42ZA Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies10.1038/s41467-019-09639-32041-1723https://doaj.org/article/52d49e5908374e5ea58127ece365e62a2019-04-01T00:00:00Zhttps://doi.org/10.1038/s41467-019-09639-3https://doaj.org/toc/2041-1723With the development of large scale single cell RNA-seq technology, population-scale scRNA-seq studies are emerging. Here, the authors develop BAMM-SC, a tool for clustering droplet-based scRNA-seq data from multiple individuals simultaneously.Zhe SunLi ChenHongyi XinYale JiangQianhui HuangAnthony R. CilloTracy TabibJay K. KollsTullia C. BrunoRobert LafyatisDario A. A. VignaliKong ChenYing DingMing HuWei ChenNature PortfolioarticleScienceQENNature Communications, Vol 10, Iss 1, Pp 1-10 (2019) |
| institution |
DOAJ |
| collection |
DOAJ |
| language |
EN |
| topic |
Science Q |
| spellingShingle |
Science Q Zhe Sun Li Chen Hongyi Xin Yale Jiang Qianhui Huang Anthony R. Cillo Tracy Tabib Jay K. Kolls Tullia C. Bruno Robert Lafyatis Dario A. A. Vignali Kong Chen Ying Ding Ming Hu Wei Chen A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies |
| description |
With the development of large scale single cell RNA-seq technology, population-scale scRNA-seq studies are emerging. Here, the authors develop BAMM-SC, a tool for clustering droplet-based scRNA-seq data from multiple individuals simultaneously. |
| format |
article |
| author |
Zhe Sun Li Chen Hongyi Xin Yale Jiang Qianhui Huang Anthony R. Cillo Tracy Tabib Jay K. Kolls Tullia C. Bruno Robert Lafyatis Dario A. A. Vignali Kong Chen Ying Ding Ming Hu Wei Chen |
| author_facet |
Zhe Sun Li Chen Hongyi Xin Yale Jiang Qianhui Huang Anthony R. Cillo Tracy Tabib Jay K. Kolls Tullia C. Bruno Robert Lafyatis Dario A. A. Vignali Kong Chen Ying Ding Ming Hu Wei Chen |
| author_sort |
Zhe Sun |
| title |
A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies |
| title_short |
A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies |
| title_full |
A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies |
| title_fullStr |
A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies |
| title_full_unstemmed |
A Bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies |
| title_sort |
bayesian mixture model for clustering droplet-based single-cell transcriptomic data from population studies |
| publisher |
Nature Portfolio |
| publishDate |
2019 |
| url |
https://doaj.org/article/52d49e5908374e5ea58127ece365e62a |
| work_keys_str_mv |
AT zhesun abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT lichen abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT hongyixin abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT yalejiang abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT qianhuihuang abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT anthonyrcillo abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT tracytabib abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT jaykkolls abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT tulliacbruno abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT robertlafyatis abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT darioaavignali abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT kongchen abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT yingding abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT minghu abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT weichen abayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT zhesun bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT lichen bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT hongyixin bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT yalejiang bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT qianhuihuang bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT anthonyrcillo bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT tracytabib bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT jaykkolls bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT tulliacbruno bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT robertlafyatis bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT darioaavignali bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT kongchen bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT yingding bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT minghu bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies AT weichen bayesianmixturemodelforclusteringdropletbasedsinglecelltranscriptomicdatafrompopulationstudies |
| _version_ |
1718390893482868736 |