Escape from nonsense-mediated decay associates with anti-tumor immunogenicity

The transcripts generated by frameshifts and indels in cancer are frequently degraded by nonsense mediated decay. Here, the authors show that some of these transcripts can escape this degradation mechanism and their prevalence correlates with tumour response to immunotherapy.

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Autores principales: Kevin Litchfield, James L. Reading, Emilia L. Lim, Hang Xu, Po Liu, Maise Al-Bakir, Yien Ning Sophia Wong, Andrew Rowan, Samuel A. Funt, Taha Merghoub, David Perkins, Martin Lauss, Inge Marie Svane, Göran Jönsson, Javier Herrero, James Larkin, Sergio A. Quezada, Matthew D. Hellmann, Samra Turajlic, Charles Swanton
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Lenguaje:EN
Publicado: Nature Portfolio 2020
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Acceso en línea:https://doaj.org/article/5361db97aec7487d9e4b4732b41ccecf
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spelling oai:doaj.org-article:5361db97aec7487d9e4b4732b41ccecf2021-12-02T16:14:05ZEscape from nonsense-mediated decay associates with anti-tumor immunogenicity10.1038/s41467-020-17526-52041-1723https://doaj.org/article/5361db97aec7487d9e4b4732b41ccecf2020-07-01T00:00:00Zhttps://doi.org/10.1038/s41467-020-17526-5https://doaj.org/toc/2041-1723The transcripts generated by frameshifts and indels in cancer are frequently degraded by nonsense mediated decay. Here, the authors show that some of these transcripts can escape this degradation mechanism and their prevalence correlates with tumour response to immunotherapy.Kevin LitchfieldJames L. ReadingEmilia L. LimHang XuPo LiuMaise Al-BakirYien Ning Sophia WongAndrew RowanSamuel A. FuntTaha MerghoubDavid PerkinsMartin LaussInge Marie SvaneGöran JönssonJavier HerreroJames LarkinSergio A. QuezadaMatthew D. HellmannSamra TurajlicCharles SwantonNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-11 (2020)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Kevin Litchfield
James L. Reading
Emilia L. Lim
Hang Xu
Po Liu
Maise Al-Bakir
Yien Ning Sophia Wong
Andrew Rowan
Samuel A. Funt
Taha Merghoub
David Perkins
Martin Lauss
Inge Marie Svane
Göran Jönsson
Javier Herrero
James Larkin
Sergio A. Quezada
Matthew D. Hellmann
Samra Turajlic
Charles Swanton
Escape from nonsense-mediated decay associates with anti-tumor immunogenicity
description The transcripts generated by frameshifts and indels in cancer are frequently degraded by nonsense mediated decay. Here, the authors show that some of these transcripts can escape this degradation mechanism and their prevalence correlates with tumour response to immunotherapy.
format article
author Kevin Litchfield
James L. Reading
Emilia L. Lim
Hang Xu
Po Liu
Maise Al-Bakir
Yien Ning Sophia Wong
Andrew Rowan
Samuel A. Funt
Taha Merghoub
David Perkins
Martin Lauss
Inge Marie Svane
Göran Jönsson
Javier Herrero
James Larkin
Sergio A. Quezada
Matthew D. Hellmann
Samra Turajlic
Charles Swanton
author_facet Kevin Litchfield
James L. Reading
Emilia L. Lim
Hang Xu
Po Liu
Maise Al-Bakir
Yien Ning Sophia Wong
Andrew Rowan
Samuel A. Funt
Taha Merghoub
David Perkins
Martin Lauss
Inge Marie Svane
Göran Jönsson
Javier Herrero
James Larkin
Sergio A. Quezada
Matthew D. Hellmann
Samra Turajlic
Charles Swanton
author_sort Kevin Litchfield
title Escape from nonsense-mediated decay associates with anti-tumor immunogenicity
title_short Escape from nonsense-mediated decay associates with anti-tumor immunogenicity
title_full Escape from nonsense-mediated decay associates with anti-tumor immunogenicity
title_fullStr Escape from nonsense-mediated decay associates with anti-tumor immunogenicity
title_full_unstemmed Escape from nonsense-mediated decay associates with anti-tumor immunogenicity
title_sort escape from nonsense-mediated decay associates with anti-tumor immunogenicity
publisher Nature Portfolio
publishDate 2020
url https://doaj.org/article/5361db97aec7487d9e4b4732b41ccecf
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