Accurate absolute free energies for ligand–protein binding based on non-equilibrium approaches

Molecular dynamics-based approaches to calculate absolute protein–ligand binding free energy often rely on equilibrium free energy perturbation (FEP) protocols. Here, the authors study ligands binding to bromodomains and T4 lysozyme and find that both equilibrium and non-equilibrium approaches conve...

Full description

Saved in:
Bibliographic Details
Main Authors: Vytautas Gapsys, Ahmet Yildirim, Matteo Aldeghi, Yuriy Khalak, David van der Spoel, Bert L. de Groot
Format: article
Language:EN
Published: Nature Portfolio 2021
Subjects:
Online Access:https://doaj.org/article/53ecbf2eedd34149bc3dad8e7658da0f
Tags: Add Tag
No Tags, Be the first to tag this record!