Genome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance

Abstract Polyploidy in plants can bestow long-term evolutionary flexibility and resistance to biotic and abiotic stresses. The upstream activation mechanisms of salt response remain unknown. Here we integrated transcriptome, miRNA and proteome data to describe the link between abscisic acid (ABA)-ef...

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Autores principales:	Guoqiang Fan, Limin Wang, Yanpeng Dong, Zhenli Zhao, Minjie Deng, Suyan Niu, Xiaoshen Zhang, Xibing Cao
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2017
Materias:	Medicine R Science Q
Acceso en línea:	https://doaj.org/article/585d0997edab4b488b44975415cf8269
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spelling	oai:doaj.org-article:585d0997edab4b488b44975415cf82692021-12-02T16:08:11ZGenome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance10.1038/s41598-017-01360-92045-2322https://doaj.org/article/585d0997edab4b488b44975415cf82692017-04-01T00:00:00Zhttps://doi.org/10.1038/s41598-017-01360-9https://doaj.org/toc/2045-2322Abstract Polyploidy in plants can bestow long-term evolutionary flexibility and resistance to biotic and abiotic stresses. The upstream activation mechanisms of salt response remain unknown. Here we integrated transcriptome, miRNA and proteome data to describe the link between abscisic acid (ABA)-effectors and salt resistance against the background of Paulownia genome. Combing GO and KEGG pathway annotation of differentially expressed genes and proteins, as well as differentially expressed miRNA, these results reflect endogenous signal ABA activate the downstream effectors, such as ion channel effectors and oxido-reduction effectors, to maintain the homeostasis of Paulownia’s growth. The cascaded metabolic network involved ABA biosynthesis, signaling transduction and the response of effectors. Our results will contribute to a comprehensive understanding of the genetic basis of salt tolerance, which may help to expand the available arable land for P. fortunei cultivation.Guoqiang FanLimin WangYanpeng DongZhenli ZhaoMinjie DengSuyan NiuXiaoshen ZhangXibing CaoNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 7, Iss 1, Pp 1-17 (2017)
institution	DOAJ
collection	DOAJ
language	EN
topic	Medicine R Science Q
spellingShingle	Medicine R Science Q Guoqiang Fan Limin Wang Yanpeng Dong Zhenli Zhao Minjie Deng Suyan Niu Xiaoshen Zhang Xibing Cao Genome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance
description	Abstract Polyploidy in plants can bestow long-term evolutionary flexibility and resistance to biotic and abiotic stresses. The upstream activation mechanisms of salt response remain unknown. Here we integrated transcriptome, miRNA and proteome data to describe the link between abscisic acid (ABA)-effectors and salt resistance against the background of Paulownia genome. Combing GO and KEGG pathway annotation of differentially expressed genes and proteins, as well as differentially expressed miRNA, these results reflect endogenous signal ABA activate the downstream effectors, such as ion channel effectors and oxido-reduction effectors, to maintain the homeostasis of Paulownia’s growth. The cascaded metabolic network involved ABA biosynthesis, signaling transduction and the response of effectors. Our results will contribute to a comprehensive understanding of the genetic basis of salt tolerance, which may help to expand the available arable land for P. fortunei cultivation.
format	article
author	Guoqiang Fan Limin Wang Yanpeng Dong Zhenli Zhao Minjie Deng Suyan Niu Xiaoshen Zhang Xibing Cao
author_facet	Guoqiang Fan Limin Wang Yanpeng Dong Zhenli Zhao Minjie Deng Suyan Niu Xiaoshen Zhang Xibing Cao
author_sort	Guoqiang Fan
title	Genome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance
title_short	Genome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance
title_full	Genome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance
title_fullStr	Genome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance
title_full_unstemmed	Genome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance
title_sort	genome of paulownia (paulownia fortunei) illuminates the related transcripts, mirna and proteins for salt resistance
publisher	Nature Portfolio
publishDate	2017
url	https://doaj.org/article/585d0997edab4b488b44975415cf8269
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Genome of Paulownia (Paulownia fortunei) illuminates the related transcripts, miRNA and proteins for salt resistance

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