Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design

Thermostability of the peptide-MHC interaction is important for immunogenicity. Here the authors present a mass spectrometry method to measure thermostability among thousands of peptide-MHC complexes in parallel and a trained artificial neural network to predict immunogenenicity of cancer antigens.

Guardado en:
Detalles Bibliográficos
Autores principales: Emma C. Jappe, Christian Garde, Sri H. Ramarathinam, Ethan Passantino, Patricia T. Illing, Nicole A. Mifsud, Thomas Trolle, Jens V. Kringelum, Nathan P. Croft, Anthony W. Purcell
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2020
Materias:
Q
Acceso en línea:https://doaj.org/article/5cf6ee2c88c54b69ae8a7c1723f4491d
Etiquetas: Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
id oai:doaj.org-article:5cf6ee2c88c54b69ae8a7c1723f4491d
record_format dspace
spelling oai:doaj.org-article:5cf6ee2c88c54b69ae8a7c1723f4491d2021-12-02T13:27:31ZThermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design10.1038/s41467-020-20166-42041-1723https://doaj.org/article/5cf6ee2c88c54b69ae8a7c1723f4491d2020-12-01T00:00:00Zhttps://doi.org/10.1038/s41467-020-20166-4https://doaj.org/toc/2041-1723Thermostability of the peptide-MHC interaction is important for immunogenicity. Here the authors present a mass spectrometry method to measure thermostability among thousands of peptide-MHC complexes in parallel and a trained artificial neural network to predict immunogenenicity of cancer antigens.Emma C. JappeChristian GardeSri H. RamarathinamEthan PassantinoPatricia T. IllingNicole A. MifsudThomas TrolleJens V. KringelumNathan P. CroftAnthony W. PurcellNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-9 (2020)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Emma C. Jappe
Christian Garde
Sri H. Ramarathinam
Ethan Passantino
Patricia T. Illing
Nicole A. Mifsud
Thomas Trolle
Jens V. Kringelum
Nathan P. Croft
Anthony W. Purcell
Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design
description Thermostability of the peptide-MHC interaction is important for immunogenicity. Here the authors present a mass spectrometry method to measure thermostability among thousands of peptide-MHC complexes in parallel and a trained artificial neural network to predict immunogenenicity of cancer antigens.
format article
author Emma C. Jappe
Christian Garde
Sri H. Ramarathinam
Ethan Passantino
Patricia T. Illing
Nicole A. Mifsud
Thomas Trolle
Jens V. Kringelum
Nathan P. Croft
Anthony W. Purcell
author_facet Emma C. Jappe
Christian Garde
Sri H. Ramarathinam
Ethan Passantino
Patricia T. Illing
Nicole A. Mifsud
Thomas Trolle
Jens V. Kringelum
Nathan P. Croft
Anthony W. Purcell
author_sort Emma C. Jappe
title Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design
title_short Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design
title_full Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design
title_fullStr Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design
title_full_unstemmed Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design
title_sort thermostability profiling of mhc-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design
publisher Nature Portfolio
publishDate 2020
url https://doaj.org/article/5cf6ee2c88c54b69ae8a7c1723f4491d
work_keys_str_mv AT emmacjappe thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT christiangarde thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT srihramarathinam thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT ethanpassantino thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT patriciatilling thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT nicoleamifsud thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT thomastrolle thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT jensvkringelum thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT nathanpcroft thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
AT anthonywpurcell thermostabilityprofilingofmhcboundpeptidesanewdimensioninimmunopeptidomicsandaidforimmunotherapydesign
_version_ 1718392976542007296