Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers

Abstract. Rinawati DY, Reflinur, Dinarti D, Sudarsono. 2021. Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers. Biodiversitas 22: 3749-3755. Sugar palm (Arenga pinnata (Wurmb) Merr.) has an important economic and conservation value. Indonesi...

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Autores principales:	DIAN YUNITA Rinawati, Reflinur Reflinur, Diny Dinarti, Sudarsono Sudarsono
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2021
Materias:	arenga pinnata genetic diversity sugar palm molecular merker genetic distance Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/615e2bc20c734a1b903afd99b7643343
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spelling	oai:doaj.org-article:615e2bc20c734a1b903afd99b76433432021-11-22T12:18:55ZGenetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers1412-033X2085-472210.13057/biodiv/d220919https://doaj.org/article/615e2bc20c734a1b903afd99b76433432021-08-01T00:00:00Zhttps://smujo.id/biodiv/article/view/9102https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Abstract. Rinawati DY, Reflinur, Dinarti D, Sudarsono. 2021. Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers. Biodiversitas 22: 3749-3755. Sugar palm (Arenga pinnata (Wurmb) Merr.) has an important economic and conservation value. Indonesia has genetic diversity potential of sugar palm, considering the widespread distribution of sugar palm in Indonesia which has variations in geographical type. This study aims to determine the diversity and relationship of sugar palm from nine regions in Indonesia based on SSR markers. The genetic material consists of 141 sugar palm accessions derived from Bangka, Lampung, Lebak, Bogor, Tasikmalaya, Brebes, Gowa, Bombana, and Muna. Nine pairs of SSR primers were used for genotyping. The highest and lowest genetic diversity was found in the Bangka and Muna populations, respectively. The genetic diversity within a population (79%) was higher than the genetic diversity between populations (21%). The genetic distance between Bangka and Lebak is the closest (0.033), while between Lampung and Muna is the farthest (0.283). The accession relationship is divided into three major clusters. Clusters 1 consisted of Bangka, Lampung, Bogor, Tasikmalaya, Brebes, Gowa, Bombana and Muna accessions. Cluster 2 consisted of Bangka, Lampung, Lebak, Bogor, Tasikmalaya, Brebes, and Gowa accessions. Cluster 3 consisted of Bangka, Lebak, Brebes, Tasikmalaya, and Gowa accessions. Accession clustering does not show a typical relationship pattern based on geographic location.DIAN YUNITA RinawatiReflinur ReflinurDiny DinartiSudarsono SudarsonoMBI & UNS Soloarticlearenga pinnatagenetic diversitysugar palmmolecular merkergenetic distanceBiology (General)QH301-705.5ENBiodiversitas, Vol 22, Iss 9 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	arenga pinnata genetic diversity sugar palm molecular merker genetic distance Biology (General) QH301-705.5
spellingShingle	arenga pinnata genetic diversity sugar palm molecular merker genetic distance Biology (General) QH301-705.5 DIAN YUNITA Rinawati Reflinur Reflinur Diny Dinarti Sudarsono Sudarsono Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers
description	Abstract. Rinawati DY, Reflinur, Dinarti D, Sudarsono. 2021. Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers. Biodiversitas 22: 3749-3755. Sugar palm (Arenga pinnata (Wurmb) Merr.) has an important economic and conservation value. Indonesia has genetic diversity potential of sugar palm, considering the widespread distribution of sugar palm in Indonesia which has variations in geographical type. This study aims to determine the diversity and relationship of sugar palm from nine regions in Indonesia based on SSR markers. The genetic material consists of 141 sugar palm accessions derived from Bangka, Lampung, Lebak, Bogor, Tasikmalaya, Brebes, Gowa, Bombana, and Muna. Nine pairs of SSR primers were used for genotyping. The highest and lowest genetic diversity was found in the Bangka and Muna populations, respectively. The genetic diversity within a population (79%) was higher than the genetic diversity between populations (21%). The genetic distance between Bangka and Lebak is the closest (0.033), while between Lampung and Muna is the farthest (0.283). The accession relationship is divided into three major clusters. Clusters 1 consisted of Bangka, Lampung, Bogor, Tasikmalaya, Brebes, Gowa, Bombana and Muna accessions. Cluster 2 consisted of Bangka, Lampung, Lebak, Bogor, Tasikmalaya, Brebes, and Gowa accessions. Cluster 3 consisted of Bangka, Lebak, Brebes, Tasikmalaya, and Gowa accessions. Accession clustering does not show a typical relationship pattern based on geographic location.
format	article
author	DIAN YUNITA Rinawati Reflinur Reflinur Diny Dinarti Sudarsono Sudarsono
author_facet	DIAN YUNITA Rinawati Reflinur Reflinur Diny Dinarti Sudarsono Sudarsono
author_sort	DIAN YUNITA Rinawati
title	Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers
title_short	Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers
title_full	Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers
title_fullStr	Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers
title_full_unstemmed	Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers
title_sort	genetic diversity of sugar palm (arenga pinnata) derived from nine regions in indonesia based on ssr markers
publisher	MBI & UNS Solo
publishDate	2021
url	https://doaj.org/article/615e2bc20c734a1b903afd99b7643343
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Genetic diversity of sugar palm (Arenga pinnata) derived from nine regions in Indonesia based on SSR markers

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