Strainberry: automated strain separation in low-complexity metagenomes using long reads

Existing long-read de novo assembly methods can partially, but not completely, separate strains. Here, the authors develop Strainberry, a metagenome assembly bioinformatic pipeline that exclusively uses longread data to accurately separate and reconstruct strain genomes from single-sample low-comple...

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Autores principales: Riccardo Vicedomini, Christopher Quince, Aaron E. Darling, Rayan Chikhi
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2021
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Acceso en línea:https://doaj.org/article/6319ba8e68474bc9b3176b9f70701619
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