Genome-wide association study of periodontal pocketing in Finnish adults
Abstract Background A genome‐wide association study is an analytical approach that investigates whether genetic variants across the whole genome contribute to disease progression. The aim of this study was to investigate genome-wide associations of periodontal condition measured as deepened periodon...
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2021
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oai:doaj.org-article:66338f62800f40b4b9ac123ef7eed0532021-12-05T12:20:29ZGenome-wide association study of periodontal pocketing in Finnish adults10.1186/s12903-021-01964-81472-6831https://doaj.org/article/66338f62800f40b4b9ac123ef7eed0532021-11-01T00:00:00Zhttps://doi.org/10.1186/s12903-021-01964-8https://doaj.org/toc/1472-6831Abstract Background A genome‐wide association study is an analytical approach that investigates whether genetic variants across the whole genome contribute to disease progression. The aim of this study was to investigate genome-wide associations of periodontal condition measured as deepened periodontal pockets (≥ 4 mm) in Finnish adults. Methods This study was based on the data of the national Health 2000 Survey (BRIF8901) in Finland and the Northern Finland Birth Cohort 1966 Study totalling 3,245 individuals. The genotype data were analyzed using the SNPTEST v.2.4.1. The number of teeth with deepened periodontal pockets (≥ 4 mm deep) was employed as a continuous response variable in additive regression analyses performed separately for the two studies and the results were combined in a meta-analysis applying a fixed effects model. Results Genome-wide significant associations with the number of teeth with ≥ 4 mm deep pockets were not found at the p-level of < 5 × 10−8, while in total 17 loci reached the p-level of 5 × 10−6. Of the top hits, SNP rs4444613 in chromosome 20 showed the strongest association (p = 1.35 × 10−7). Conclusion No statistically significant genome-wide associations with deepened periodontal pockets were found in this study.Paula TegelbergJussi Miikkael LeppilahtiAtte YlöstaloTellervo TervonenJohannes KettunenAnna Liisa SuominenPekka YlöstaloBMCarticleEpidemiologic studiesGenome-wide association studyPeriodontal pocketPeriodontitisDentistryRK1-715ENBMC Oral Health, Vol 21, Iss 1, Pp 1-9 (2021) |
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DOAJ |
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DOAJ |
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EN |
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Epidemiologic studies Genome-wide association study Periodontal pocket Periodontitis Dentistry RK1-715 |
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Epidemiologic studies Genome-wide association study Periodontal pocket Periodontitis Dentistry RK1-715 Paula Tegelberg Jussi Miikkael Leppilahti Atte Ylöstalo Tellervo Tervonen Johannes Kettunen Anna Liisa Suominen Pekka Ylöstalo Genome-wide association study of periodontal pocketing in Finnish adults |
| description |
Abstract Background A genome‐wide association study is an analytical approach that investigates whether genetic variants across the whole genome contribute to disease progression. The aim of this study was to investigate genome-wide associations of periodontal condition measured as deepened periodontal pockets (≥ 4 mm) in Finnish adults. Methods This study was based on the data of the national Health 2000 Survey (BRIF8901) in Finland and the Northern Finland Birth Cohort 1966 Study totalling 3,245 individuals. The genotype data were analyzed using the SNPTEST v.2.4.1. The number of teeth with deepened periodontal pockets (≥ 4 mm deep) was employed as a continuous response variable in additive regression analyses performed separately for the two studies and the results were combined in a meta-analysis applying a fixed effects model. Results Genome-wide significant associations with the number of teeth with ≥ 4 mm deep pockets were not found at the p-level of < 5 × 10−8, while in total 17 loci reached the p-level of 5 × 10−6. Of the top hits, SNP rs4444613 in chromosome 20 showed the strongest association (p = 1.35 × 10−7). Conclusion No statistically significant genome-wide associations with deepened periodontal pockets were found in this study. |
| format |
article |
| author |
Paula Tegelberg Jussi Miikkael Leppilahti Atte Ylöstalo Tellervo Tervonen Johannes Kettunen Anna Liisa Suominen Pekka Ylöstalo |
| author_facet |
Paula Tegelberg Jussi Miikkael Leppilahti Atte Ylöstalo Tellervo Tervonen Johannes Kettunen Anna Liisa Suominen Pekka Ylöstalo |
| author_sort |
Paula Tegelberg |
| title |
Genome-wide association study of periodontal pocketing in Finnish adults |
| title_short |
Genome-wide association study of periodontal pocketing in Finnish adults |
| title_full |
Genome-wide association study of periodontal pocketing in Finnish adults |
| title_fullStr |
Genome-wide association study of periodontal pocketing in Finnish adults |
| title_full_unstemmed |
Genome-wide association study of periodontal pocketing in Finnish adults |
| title_sort |
genome-wide association study of periodontal pocketing in finnish adults |
| publisher |
BMC |
| publishDate |
2021 |
| url |
https://doaj.org/article/66338f62800f40b4b9ac123ef7eed053 |
| work_keys_str_mv |
AT paulategelberg genomewideassociationstudyofperiodontalpocketinginfinnishadults AT jussimiikkaelleppilahti genomewideassociationstudyofperiodontalpocketinginfinnishadults AT atteylostalo genomewideassociationstudyofperiodontalpocketinginfinnishadults AT tellervotervonen genomewideassociationstudyofperiodontalpocketinginfinnishadults AT johanneskettunen genomewideassociationstudyofperiodontalpocketinginfinnishadults AT annaliisasuominen genomewideassociationstudyofperiodontalpocketinginfinnishadults AT pekkaylostalo genomewideassociationstudyofperiodontalpocketinginfinnishadults |
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1718372020796784640 |