Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).

The main objectives of this study are estimate a species-dense, time-calibrated molecular phylogeny of Hypoptopomatinae, Neoplecostominae, and Otothyrinae, which together comprise a group of armoured catfishes that is widely distributed across South America, to place the origin of major clades in ti...

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Autores principales:	Fábio F Roxo, James S Albert, Gabriel S C Silva, Cláudio H Zawadzki, Fausto Foresti, Claudio Oliveira
Formato:	article
Lenguaje:	EN
Publicado:	Public Library of Science (PLoS) 2014
Materias:	Medicine R Science Q
Acceso en línea:	https://doaj.org/article/6c7999a001694673a6235a665bf81bdb
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spelling	oai:doaj.org-article:6c7999a001694673a6235a665bf81bdb2021-11-25T06:03:29ZMolecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).1932-620310.1371/journal.pone.0105564https://doaj.org/article/6c7999a001694673a6235a665bf81bdb2014-01-01T00:00:00Zhttps://www.ncbi.nlm.nih.gov/pmc/articles/pmid/25148406/?tool=EBIhttps://doaj.org/toc/1932-6203The main objectives of this study are estimate a species-dense, time-calibrated molecular phylogeny of Hypoptopomatinae, Neoplecostominae, and Otothyrinae, which together comprise a group of armoured catfishes that is widely distributed across South America, to place the origin of major clades in time and space, and to demonstrate the role of river capture on patterns of diversification in these taxa. We used maximum likelihood and Bayesian methods to estimate a time-calibrated phylogeny of 115 loricariid species, using three mitochondrial and one nuclear genes to generate a matrix of 4,500 base pairs, and used parametric biogeographic analyses to estimate ancestral geographic ranges and to infer the effects of river capture events on the geographic distributions of these taxa. Our analysis recovered Hypoptopomatinae, Neoplecostominae, and Otothyrinae as monophyletic with strong statistical support, and Neoplecostominae as more closely related to Otothyrinae than to Hypoptopomatinae. Our time-calibrated phylogeny and ancestral-area estimations indicate an origin of Hypoptopomatinae, Neoplecostominae, and Otothyrinae during the Lower Eocene in the Atlantic Coastal Drainages, from which it is possible to infer several dispersal events to adjacent river basins during the Neogene. In conclusion we infer a strong influence of river capture in: (1) the accumulation of modern clade species-richness values; (2) the formation of the modern basin-wide species assemblages, and (3) the presence of many low-diversity, early-branching lineages restricted to the Atlantic Coastal Drainages. We further infer the importance of headwater stream capture and marine transgressions in shaping patterns in the distributions of Hypoptopomatinae, Neoplecostominae and Otothyrinae throughout South America.Fábio F RoxoJames S AlbertGabriel S C SilvaCláudio H ZawadzkiFausto ForestiClaudio OliveiraPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 9, Iss 8, p e105564 (2014)
institution	DOAJ
collection	DOAJ
language	EN
topic	Medicine R Science Q
spellingShingle	Medicine R Science Q Fábio F Roxo James S Albert Gabriel S C Silva Cláudio H Zawadzki Fausto Foresti Claudio Oliveira Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).
description	The main objectives of this study are estimate a species-dense, time-calibrated molecular phylogeny of Hypoptopomatinae, Neoplecostominae, and Otothyrinae, which together comprise a group of armoured catfishes that is widely distributed across South America, to place the origin of major clades in time and space, and to demonstrate the role of river capture on patterns of diversification in these taxa. We used maximum likelihood and Bayesian methods to estimate a time-calibrated phylogeny of 115 loricariid species, using three mitochondrial and one nuclear genes to generate a matrix of 4,500 base pairs, and used parametric biogeographic analyses to estimate ancestral geographic ranges and to infer the effects of river capture events on the geographic distributions of these taxa. Our analysis recovered Hypoptopomatinae, Neoplecostominae, and Otothyrinae as monophyletic with strong statistical support, and Neoplecostominae as more closely related to Otothyrinae than to Hypoptopomatinae. Our time-calibrated phylogeny and ancestral-area estimations indicate an origin of Hypoptopomatinae, Neoplecostominae, and Otothyrinae during the Lower Eocene in the Atlantic Coastal Drainages, from which it is possible to infer several dispersal events to adjacent river basins during the Neogene. In conclusion we infer a strong influence of river capture in: (1) the accumulation of modern clade species-richness values; (2) the formation of the modern basin-wide species assemblages, and (3) the presence of many low-diversity, early-branching lineages restricted to the Atlantic Coastal Drainages. We further infer the importance of headwater stream capture and marine transgressions in shaping patterns in the distributions of Hypoptopomatinae, Neoplecostominae and Otothyrinae throughout South America.
format	article
author	Fábio F Roxo James S Albert Gabriel S C Silva Cláudio H Zawadzki Fausto Foresti Claudio Oliveira
author_facet	Fábio F Roxo James S Albert Gabriel S C Silva Cláudio H Zawadzki Fausto Foresti Claudio Oliveira
author_sort	Fábio F Roxo
title	Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).
title_short	Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).
title_full	Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).
title_fullStr	Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).
title_full_unstemmed	Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).
title_sort	molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).
publisher	Public Library of Science (PLoS)
publishDate	2014
url	https://doaj.org/article/6c7999a001694673a6235a665bf81bdb
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Molecular phylogeny and biogeographic history of the armored neotropical catfish subfamilies hypoptopomatinae, neoplecostominae and otothyrinae (siluriformes: loricariidae).

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