Genetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers

Abstract. Alhamdi MFF, Setiawan A, Ilyas S, Ho WK. 2020. Genetic variability of Indonesian landraces of Vigna subterranea: The morphological characteristics and molecular analysis using SSR markers. Biodiversitas 21: 3929-3937. Bambara groundnut (Vigna subterranea (L.) Verdc.) is a potential grain,...

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Autores principales:	MUHAMMAD FAUZAN FARID ALHAMDI, Asep Setiawan, Satriyas Ilyas, Wai Kuan Ho
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2020
Materias:	capillary electrophoresis, leaf shape, pod shape, simple sequence repeat, testa color Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/6ed013af810b419893f8bf09d9a16682
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spelling	oai:doaj.org-article:6ed013af810b419893f8bf09d9a166822021-11-22T00:41:43ZGenetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers1412-033X2085-472210.13057/biodiv/d210902https://doaj.org/article/6ed013af810b419893f8bf09d9a166822020-08-01T00:00:00Zhttps://smujo.id/biodiv/article/view/6499https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Abstract. Alhamdi MFF, Setiawan A, Ilyas S, Ho WK. 2020. Genetic variability of Indonesian landraces of Vigna subterranea: The morphological characteristics and molecular analysis using SSR markers. Biodiversitas 21: 3929-3937. Bambara groundnut (Vigna subterranea (L.) Verdc.) is a potential grain, which can be considered as an alternative source of protein and carbohydrate. Due to unavailability of commercial bambara groundut cultivar in Indonesia, the characterization of bambara groundnut landraces is an important step before developing cultivar with traits of interest. The objective of the research was to access genetic variability of Indonesian landraces of bambara groundnut with different seed coat colors based on morphological and molecular markers. The experiment was arranged as split-plot in a complete randomized block design with the main plot was cultivation methods and the sub plot was landraces. There were differences in leaf shape and pod shape among the landraces. There were two main clusters of Indonesian landraces of bambara groundnut with 88.28% similarity. The first cluster was Cream, Brown Sumedang, Black Sumedang and Black Tasikmalaya, and the second cluster was Black Sukabumi, Brown Gresik, Black Madura, and Black Gresik. The result based on SSR marker with capillary electrophoresis indicated Black Gresik and Black Madura landraces were different from other Indonesian landraces. Cream Sumedang or Brown Sumedang from the first cluster and Black Gresik or Brown Gresik from the second cluster have the farthest distances for developing improved variety of bambara groundnut.MUHAMMAD FAUZAN FARID ALHAMDIAsep SetiawanSatriyas IlyasWai Kuan HoMBI & UNS Soloarticlecapillary electrophoresis, leaf shape, pod shape, simple sequence repeat, testa colorBiology (General)QH301-705.5ENBiodiversitas, Vol 21, Iss 9 (2020)
institution	DOAJ
collection	DOAJ
language	EN
topic	capillary electrophoresis, leaf shape, pod shape, simple sequence repeat, testa color Biology (General) QH301-705.5
spellingShingle	capillary electrophoresis, leaf shape, pod shape, simple sequence repeat, testa color Biology (General) QH301-705.5 MUHAMMAD FAUZAN FARID ALHAMDI Asep Setiawan Satriyas Ilyas Wai Kuan Ho Genetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers
description	Abstract. Alhamdi MFF, Setiawan A, Ilyas S, Ho WK. 2020. Genetic variability of Indonesian landraces of Vigna subterranea: The morphological characteristics and molecular analysis using SSR markers. Biodiversitas 21: 3929-3937. Bambara groundnut (Vigna subterranea (L.) Verdc.) is a potential grain, which can be considered as an alternative source of protein and carbohydrate. Due to unavailability of commercial bambara groundut cultivar in Indonesia, the characterization of bambara groundnut landraces is an important step before developing cultivar with traits of interest. The objective of the research was to access genetic variability of Indonesian landraces of bambara groundnut with different seed coat colors based on morphological and molecular markers. The experiment was arranged as split-plot in a complete randomized block design with the main plot was cultivation methods and the sub plot was landraces. There were differences in leaf shape and pod shape among the landraces. There were two main clusters of Indonesian landraces of bambara groundnut with 88.28% similarity. The first cluster was Cream, Brown Sumedang, Black Sumedang and Black Tasikmalaya, and the second cluster was Black Sukabumi, Brown Gresik, Black Madura, and Black Gresik. The result based on SSR marker with capillary electrophoresis indicated Black Gresik and Black Madura landraces were different from other Indonesian landraces. Cream Sumedang or Brown Sumedang from the first cluster and Black Gresik or Brown Gresik from the second cluster have the farthest distances for developing improved variety of bambara groundnut.
format	article
author	MUHAMMAD FAUZAN FARID ALHAMDI Asep Setiawan Satriyas Ilyas Wai Kuan Ho
author_facet	MUHAMMAD FAUZAN FARID ALHAMDI Asep Setiawan Satriyas Ilyas Wai Kuan Ho
author_sort	MUHAMMAD FAUZAN FARID ALHAMDI
title	Genetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers
title_short	Genetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers
title_full	Genetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers
title_fullStr	Genetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers
title_full_unstemmed	Genetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers
title_sort	genetic variability of indonesian landraces of vigna subterranea: morphological characteristics and molecular analysis using ssr markers
publisher	MBI & UNS Solo
publishDate	2020
url	https://doaj.org/article/6ed013af810b419893f8bf09d9a16682
work_keys_str_mv	AT muhammadfauzanfaridalhamdi geneticvariabilityofindonesianlandracesofvignasubterraneamorphologicalcharacteristicsandmolecularanalysisusingssrmarkers AT asepsetiawan geneticvariabilityofindonesianlandracesofvignasubterraneamorphologicalcharacteristicsandmolecularanalysisusingssrmarkers AT satriyasilyas geneticvariabilityofindonesianlandracesofvignasubterraneamorphologicalcharacteristicsandmolecularanalysisusingssrmarkers AT waikuanho geneticvariabilityofindonesianlandracesofvignasubterraneamorphologicalcharacteristicsandmolecularanalysisusingssrmarkers
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Genetic variability of Indonesian landraces of Vigna subterranea: Morphological characteristics and molecular analysis using SSR markers

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