RBPSpot: Learning on appropriate contextual information for RBP binding sites discovery

Summary: Identifying the factors determining the RBP-RNA interactions remains a big challenge. It involves sparse binding motifs and a suitable sequence context for binding. The present work describes an approach to detect RBP binding sites in RNAs using an ultra-fast inexact k-mers search for stati...

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Bibliographic Details
Main Authors: Nitesh Kumar Sharma, Sagar Gupta, Ashwani Kumar, Prakash Kumar, Upendra Kumar Pradhan, Ravi Shankar
Format: article
Language:EN
Published: Elsevier 2021
Subjects:
Q
Online Access:https://doaj.org/article/6f67ca246bed473b92c2e7b266e6a876
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