A comparison of peak callers used for DNase-Seq data.

Genome-wide profiling of open chromatin regions using DNase I and high-throughput sequencing (DNase-seq) is an increasingly popular approach for finding and studying regulatory elements. A variety of algorithms have been developed to identify regions of open chromatin from raw sequence-tag data, whi...

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Bibliographic Details
Main Authors: Hashem Koohy, Thomas A Down, Mikhail Spivakov, Tim Hubbard
Format: article
Language:EN
Published: Public Library of Science (PLoS) 2014
Subjects:
R
Q
Online Access:https://doaj.org/article/72529f33aa2046fc876b6f845a6a1978
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