Genetic diversity of G3 rotavirus strains circulating in Argentina during 1998-2012 assessed by full genome analyses.
Seasonal shifts in the predominant strains and the periodic emergence of new strains are epidemiological features of human rotaviruses. After the sporadic detection in two samples in 1998, G3P[8] strains reemerged as the predominant rotavirus during 2008-2009 in Argentina. Notably, in 2011 6.3% (37/...
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oai:doaj.org-article:781a432695d8498988679fce93a3b88f2021-11-25T05:55:35ZGenetic diversity of G3 rotavirus strains circulating in Argentina during 1998-2012 assessed by full genome analyses.1932-620310.1371/journal.pone.0110341https://doaj.org/article/781a432695d8498988679fce93a3b88f2014-01-01T00:00:00Zhttps://doi.org/10.1371/journal.pone.0110341https://doaj.org/toc/1932-6203Seasonal shifts in the predominant strains and the periodic emergence of new strains are epidemiological features of human rotaviruses. After the sporadic detection in two samples in 1998, G3P[8] strains reemerged as the predominant rotavirus during 2008-2009 in Argentina. Notably, in 2011 6.3% (37/587) of samples presented the G3P[6] genotypes, which coincided with the recent detection of G3P[6] and G2P[6] strains in South America and Europe. Analyses of the 11 gene segments of four G3P[8] and two G3P[6] strains revealed that G3P[8] strains detected a decade apart (1998 and 2009) presented minor differences, while the G3P[6] strains presented a complete different genomic constellation albeit showing a similar VP7 gene. This study provides insights in the dynamics and evolution of one of the genotypes with the wider range of hosts and inter-species transmission potential.Juan Ignacio DegiuseppeGabriel Ignacio ParraJuan Andrés StupkaPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 9, Iss 10, p e110341 (2014) |
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Medicine R Science Q Juan Ignacio Degiuseppe Gabriel Ignacio Parra Juan Andrés Stupka Genetic diversity of G3 rotavirus strains circulating in Argentina during 1998-2012 assessed by full genome analyses. |
description |
Seasonal shifts in the predominant strains and the periodic emergence of new strains are epidemiological features of human rotaviruses. After the sporadic detection in two samples in 1998, G3P[8] strains reemerged as the predominant rotavirus during 2008-2009 in Argentina. Notably, in 2011 6.3% (37/587) of samples presented the G3P[6] genotypes, which coincided with the recent detection of G3P[6] and G2P[6] strains in South America and Europe. Analyses of the 11 gene segments of four G3P[8] and two G3P[6] strains revealed that G3P[8] strains detected a decade apart (1998 and 2009) presented minor differences, while the G3P[6] strains presented a complete different genomic constellation albeit showing a similar VP7 gene. This study provides insights in the dynamics and evolution of one of the genotypes with the wider range of hosts and inter-species transmission potential. |
format |
article |
author |
Juan Ignacio Degiuseppe Gabriel Ignacio Parra Juan Andrés Stupka |
author_facet |
Juan Ignacio Degiuseppe Gabriel Ignacio Parra Juan Andrés Stupka |
author_sort |
Juan Ignacio Degiuseppe |
title |
Genetic diversity of G3 rotavirus strains circulating in Argentina during 1998-2012 assessed by full genome analyses. |
title_short |
Genetic diversity of G3 rotavirus strains circulating in Argentina during 1998-2012 assessed by full genome analyses. |
title_full |
Genetic diversity of G3 rotavirus strains circulating in Argentina during 1998-2012 assessed by full genome analyses. |
title_fullStr |
Genetic diversity of G3 rotavirus strains circulating in Argentina during 1998-2012 assessed by full genome analyses. |
title_full_unstemmed |
Genetic diversity of G3 rotavirus strains circulating in Argentina during 1998-2012 assessed by full genome analyses. |
title_sort |
genetic diversity of g3 rotavirus strains circulating in argentina during 1998-2012 assessed by full genome analyses. |
publisher |
Public Library of Science (PLoS) |
publishDate |
2014 |
url |
https://doaj.org/article/781a432695d8498988679fce93a3b88f |
work_keys_str_mv |
AT juanignaciodegiuseppe geneticdiversityofg3rotavirusstrainscirculatinginargentinaduring19982012assessedbyfullgenomeanalyses AT gabrielignacioparra geneticdiversityofg3rotavirusstrainscirculatinginargentinaduring19982012assessedbyfullgenomeanalyses AT juanandresstupka geneticdiversityofg3rotavirusstrainscirculatinginargentinaduring19982012assessedbyfullgenomeanalyses |
_version_ |
1718414348439781376 |