Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion

The secretory pathway is used in the production of most biopharmaceuticals, but the associated biosynthetic costs are little understood. Here, the authors integrate the core secretory pathway into genome-scale metabolic models of human, mouse, and CHO cells, enabling in silico analysis.

Guardado en:
Detalles Bibliográficos
Autores principales: Jahir M. Gutierrez, Amir Feizi, Shangzhong Li, Thomas B. Kallehauge, Hooman Hefzi, Lise M. Grav, Daniel Ley, Deniz Baycin Hizal, Michael J. Betenbaugh, Bjorn Voldborg, Helene Faustrup Kildegaard, Gyun Min Lee, Bernhard O. Palsson, Jens Nielsen, Nathan E. Lewis
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2020
Materias:
Q
Acceso en línea:https://doaj.org/article/7b7b5cdd06f3404dbb201e1d925f5e77
Etiquetas: Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
id oai:doaj.org-article:7b7b5cdd06f3404dbb201e1d925f5e77
record_format dspace
spelling oai:doaj.org-article:7b7b5cdd06f3404dbb201e1d925f5e772021-12-02T17:32:42ZGenome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion10.1038/s41467-019-13867-y2041-1723https://doaj.org/article/7b7b5cdd06f3404dbb201e1d925f5e772020-01-01T00:00:00Zhttps://doi.org/10.1038/s41467-019-13867-yhttps://doaj.org/toc/2041-1723The secretory pathway is used in the production of most biopharmaceuticals, but the associated biosynthetic costs are little understood. Here, the authors integrate the core secretory pathway into genome-scale metabolic models of human, mouse, and CHO cells, enabling in silico analysis.Jahir M. GutierrezAmir FeiziShangzhong LiThomas B. KallehaugeHooman HefziLise M. GravDaniel LeyDeniz Baycin HizalMichael J. BetenbaughBjorn VoldborgHelene Faustrup KildegaardGyun Min LeeBernhard O. PalssonJens NielsenNathan E. LewisNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-10 (2020)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Jahir M. Gutierrez
Amir Feizi
Shangzhong Li
Thomas B. Kallehauge
Hooman Hefzi
Lise M. Grav
Daniel Ley
Deniz Baycin Hizal
Michael J. Betenbaugh
Bjorn Voldborg
Helene Faustrup Kildegaard
Gyun Min Lee
Bernhard O. Palsson
Jens Nielsen
Nathan E. Lewis
Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
description The secretory pathway is used in the production of most biopharmaceuticals, but the associated biosynthetic costs are little understood. Here, the authors integrate the core secretory pathway into genome-scale metabolic models of human, mouse, and CHO cells, enabling in silico analysis.
format article
author Jahir M. Gutierrez
Amir Feizi
Shangzhong Li
Thomas B. Kallehauge
Hooman Hefzi
Lise M. Grav
Daniel Ley
Deniz Baycin Hizal
Michael J. Betenbaugh
Bjorn Voldborg
Helene Faustrup Kildegaard
Gyun Min Lee
Bernhard O. Palsson
Jens Nielsen
Nathan E. Lewis
author_facet Jahir M. Gutierrez
Amir Feizi
Shangzhong Li
Thomas B. Kallehauge
Hooman Hefzi
Lise M. Grav
Daniel Ley
Deniz Baycin Hizal
Michael J. Betenbaugh
Bjorn Voldborg
Helene Faustrup Kildegaard
Gyun Min Lee
Bernhard O. Palsson
Jens Nielsen
Nathan E. Lewis
author_sort Jahir M. Gutierrez
title Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
title_short Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
title_full Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
title_fullStr Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
title_full_unstemmed Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
title_sort genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion
publisher Nature Portfolio
publishDate 2020
url https://doaj.org/article/7b7b5cdd06f3404dbb201e1d925f5e77
work_keys_str_mv AT jahirmgutierrez genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT amirfeizi genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT shangzhongli genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT thomasbkallehauge genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT hoomanhefzi genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT lisemgrav genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT danielley genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT denizbaycinhizal genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT michaeljbetenbaugh genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT bjornvoldborg genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT helenefaustrupkildegaard genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT gyunminlee genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT bernhardopalsson genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT jensnielsen genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
AT nathanelewis genomescalereconstructionsofthemammaliansecretorypathwaypredictmetaboliccostsandlimitationsofproteinsecretion
_version_ 1718380197628084224