PlateEditor: A web-based application for the management of multi-well plate layouts and associated data.

Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more fle...

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Autores principales: Vincent Delorme, Minjeong Woo, Virginia Carla de Almeida Falcão, Connor Wood
Formato: article
Lenguaje:EN
Publicado: Public Library of Science (PLoS) 2021
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Acceso en línea:https://doaj.org/article/869c5448998f4d0fa402d6d0c16aea65
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spelling oai:doaj.org-article:869c5448998f4d0fa402d6d0c16aea652021-12-02T20:11:11ZPlateEditor: A web-based application for the management of multi-well plate layouts and associated data.1932-620310.1371/journal.pone.0252488https://doaj.org/article/869c5448998f4d0fa402d6d0c16aea652021-01-01T00:00:00Zhttps://doi.org/10.1371/journal.pone.0252488https://doaj.org/toc/1932-6203Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more flexible solution, available anywhere, free from download, installation and licensing constraints. In this context, we created PlateEditor, a free web-based, client-side application allowing rapid creation of even complex layouts, including dose-response curves and multiple combination experiments for any plate format up to 1536 wells. PlateEditor also provides heatmap visualization and aggregation features to speed-up the process of data analysis and formatting for export in other application. Written in pure JavaScript, it is fully open-source, can be integrated in various workflows and has the potential to be extended with more functionalities in the future.Vincent DelormeMinjeong WooVirginia Carla de Almeida FalcãoConnor WoodPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 16, Iss 5, p e0252488 (2021)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Vincent Delorme
Minjeong Woo
Virginia Carla de Almeida Falcão
Connor Wood
PlateEditor: A web-based application for the management of multi-well plate layouts and associated data.
description Multi-well plates are convenient tools to work with in biology experiments, as they allow the probing of multiple conditions in a compact and economic way. Although both free and commercial software exist for the definition of plate layout and management of plate data, we were looking for a more flexible solution, available anywhere, free from download, installation and licensing constraints. In this context, we created PlateEditor, a free web-based, client-side application allowing rapid creation of even complex layouts, including dose-response curves and multiple combination experiments for any plate format up to 1536 wells. PlateEditor also provides heatmap visualization and aggregation features to speed-up the process of data analysis and formatting for export in other application. Written in pure JavaScript, it is fully open-source, can be integrated in various workflows and has the potential to be extended with more functionalities in the future.
format article
author Vincent Delorme
Minjeong Woo
Virginia Carla de Almeida Falcão
Connor Wood
author_facet Vincent Delorme
Minjeong Woo
Virginia Carla de Almeida Falcão
Connor Wood
author_sort Vincent Delorme
title PlateEditor: A web-based application for the management of multi-well plate layouts and associated data.
title_short PlateEditor: A web-based application for the management of multi-well plate layouts and associated data.
title_full PlateEditor: A web-based application for the management of multi-well plate layouts and associated data.
title_fullStr PlateEditor: A web-based application for the management of multi-well plate layouts and associated data.
title_full_unstemmed PlateEditor: A web-based application for the management of multi-well plate layouts and associated data.
title_sort plateeditor: a web-based application for the management of multi-well plate layouts and associated data.
publisher Public Library of Science (PLoS)
publishDate 2021
url https://doaj.org/article/869c5448998f4d0fa402d6d0c16aea65
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AT minjeongwoo plateeditorawebbasedapplicationforthemanagementofmultiwellplatelayoutsandassociateddata
AT virginiacarladealmeidafalcao plateeditorawebbasedapplicationforthemanagementofmultiwellplatelayoutsandassociateddata
AT connorwood plateeditorawebbasedapplicationforthemanagementofmultiwellplatelayoutsandassociateddata
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