ProtCID: a data resource for structural information on protein interactions

The authors previously developed the Protein Common Interface Database (ProtCID), which compares and clusters the interfaces of pairs of full-length protein chains with defined Pfam domain architectures in different PDB entries to identify biological assemblies. Here the authors extend ProtCID to th...

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Autores principales:	Qifang Xu, Roland L. Dunbrack
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2020
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/8d7404b0d08849d28b4e85321f97f6ba
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id	oai:doaj.org-article:8d7404b0d08849d28b4e85321f97f6ba
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spelling	oai:doaj.org-article:8d7404b0d08849d28b4e85321f97f6ba2021-12-02T16:56:49ZProtCID: a data resource for structural information on protein interactions10.1038/s41467-020-14301-42041-1723https://doaj.org/article/8d7404b0d08849d28b4e85321f97f6ba2020-02-01T00:00:00Zhttps://doi.org/10.1038/s41467-020-14301-4https://doaj.org/toc/2041-1723The authors previously developed the Protein Common Interface Database (ProtCID), which compares and clusters the interfaces of pairs of full-length protein chains with defined Pfam domain architectures in different PDB entries to identify biological assemblies. Here the authors extend ProtCID to the clustering of domain-domain interactions that also allows analyzing domain interactions with peptides, nucleic acids, and ligands.Qifang XuRoland L. DunbrackNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-16 (2020)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Qifang Xu Roland L. Dunbrack ProtCID: a data resource for structural information on protein interactions
description	The authors previously developed the Protein Common Interface Database (ProtCID), which compares and clusters the interfaces of pairs of full-length protein chains with defined Pfam domain architectures in different PDB entries to identify biological assemblies. Here the authors extend ProtCID to the clustering of domain-domain interactions that also allows analyzing domain interactions with peptides, nucleic acids, and ligands.
format	article
author	Qifang Xu Roland L. Dunbrack
author_facet	Qifang Xu Roland L. Dunbrack
author_sort	Qifang Xu
title	ProtCID: a data resource for structural information on protein interactions
title_short	ProtCID: a data resource for structural information on protein interactions
title_full	ProtCID: a data resource for structural information on protein interactions
title_fullStr	ProtCID: a data resource for structural information on protein interactions
title_full_unstemmed	ProtCID: a data resource for structural information on protein interactions
title_sort	protcid: a data resource for structural information on protein interactions
publisher	Nature Portfolio
publishDate	2020
url	https://doaj.org/article/8d7404b0d08849d28b4e85321f97f6ba
work_keys_str_mv	AT qifangxu protcidadataresourceforstructuralinformationonproteininteractions AT rolandldunbrack protcidadataresourceforstructuralinformationonproteininteractions
_version_	1718382693405687808

ProtCID: a data resource for structural information on protein interactions

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