Modeling the differences in the time-series profiles of new COVID-19 daily confirmed cases in 3,108 contiguous U.S. counties: A retrospective analysis.

<h4>Objective</h4>The COVID-19 pandemic in the U.S. has exhibited a distinct multiwave pattern beginning in March 2020. Paradoxically, most counties do not exhibit this same multiwave pattern. We aim to answer three research questions: (1) How many distinct clusters of counties exhibit s...

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Autores principales: Fadel M Megahed, L Allison Jones-Farmer, Longwen Zhao, Steven E Rigdon
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Publicado: Public Library of Science (PLoS) 2021
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spelling oai:doaj.org-article:9126fba049b34a088971df407784fded2021-12-02T20:07:44ZModeling the differences in the time-series profiles of new COVID-19 daily confirmed cases in 3,108 contiguous U.S. counties: A retrospective analysis.1932-620310.1371/journal.pone.0242896https://doaj.org/article/9126fba049b34a088971df407784fded2021-01-01T00:00:00Zhttps://doi.org/10.1371/journal.pone.0242896https://doaj.org/toc/1932-6203<h4>Objective</h4>The COVID-19 pandemic in the U.S. has exhibited a distinct multiwave pattern beginning in March 2020. Paradoxically, most counties do not exhibit this same multiwave pattern. We aim to answer three research questions: (1) How many distinct clusters of counties exhibit similar COVID-19 patterns in the time-series of daily confirmed cases? (2) What is the geographic distribution of the counties within each cluster? and (3) Are county-level demographic, socioeconomic and political variables associated with the COVID-19 case patterns?<h4>Materials and methods</h4>We analyzed data from counties in the U.S. from March 1, 2020 to January 2, 2021. Time series clustering identified clusters in the daily confirmed cases of COVID-19. An explanatory model was used to identify demographic, socioeconomic and political variables associated with the outbreak patterns.<h4>Results</h4>Three patterns were identified from the cluster solution including counties in which cases are still increasing, those that peaked in the late fall, and those with low case counts to date. Several county-level demographic, socioeconomic, and political variables showed significant associations with the identified clusters.<h4>Discussion</h4>The pattern of the outbreak is related both to the geographic location within the U.S. and several variables including population density and government response.<h4>Conclusion</h4>The reported pattern of cases in the U.S. is observed through aggregation of the daily confirmed COVID-19 cases, suggesting that local trends may be more informative. The pattern of the outbreak varies by county, and is associated with important demographic, socioeconomic, political and geographic factors.Fadel M MegahedL Allison Jones-FarmerLongwen ZhaoSteven E RigdonPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 16, Iss 11, p e0242896 (2021)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Fadel M Megahed
L Allison Jones-Farmer
Longwen Zhao
Steven E Rigdon
Modeling the differences in the time-series profiles of new COVID-19 daily confirmed cases in 3,108 contiguous U.S. counties: A retrospective analysis.
description <h4>Objective</h4>The COVID-19 pandemic in the U.S. has exhibited a distinct multiwave pattern beginning in March 2020. Paradoxically, most counties do not exhibit this same multiwave pattern. We aim to answer three research questions: (1) How many distinct clusters of counties exhibit similar COVID-19 patterns in the time-series of daily confirmed cases? (2) What is the geographic distribution of the counties within each cluster? and (3) Are county-level demographic, socioeconomic and political variables associated with the COVID-19 case patterns?<h4>Materials and methods</h4>We analyzed data from counties in the U.S. from March 1, 2020 to January 2, 2021. Time series clustering identified clusters in the daily confirmed cases of COVID-19. An explanatory model was used to identify demographic, socioeconomic and political variables associated with the outbreak patterns.<h4>Results</h4>Three patterns were identified from the cluster solution including counties in which cases are still increasing, those that peaked in the late fall, and those with low case counts to date. Several county-level demographic, socioeconomic, and political variables showed significant associations with the identified clusters.<h4>Discussion</h4>The pattern of the outbreak is related both to the geographic location within the U.S. and several variables including population density and government response.<h4>Conclusion</h4>The reported pattern of cases in the U.S. is observed through aggregation of the daily confirmed COVID-19 cases, suggesting that local trends may be more informative. The pattern of the outbreak varies by county, and is associated with important demographic, socioeconomic, political and geographic factors.
format article
author Fadel M Megahed
L Allison Jones-Farmer
Longwen Zhao
Steven E Rigdon
author_facet Fadel M Megahed
L Allison Jones-Farmer
Longwen Zhao
Steven E Rigdon
author_sort Fadel M Megahed
title Modeling the differences in the time-series profiles of new COVID-19 daily confirmed cases in 3,108 contiguous U.S. counties: A retrospective analysis.
title_short Modeling the differences in the time-series profiles of new COVID-19 daily confirmed cases in 3,108 contiguous U.S. counties: A retrospective analysis.
title_full Modeling the differences in the time-series profiles of new COVID-19 daily confirmed cases in 3,108 contiguous U.S. counties: A retrospective analysis.
title_fullStr Modeling the differences in the time-series profiles of new COVID-19 daily confirmed cases in 3,108 contiguous U.S. counties: A retrospective analysis.
title_full_unstemmed Modeling the differences in the time-series profiles of new COVID-19 daily confirmed cases in 3,108 contiguous U.S. counties: A retrospective analysis.
title_sort modeling the differences in the time-series profiles of new covid-19 daily confirmed cases in 3,108 contiguous u.s. counties: a retrospective analysis.
publisher Public Library of Science (PLoS)
publishDate 2021
url https://doaj.org/article/9126fba049b34a088971df407784fded
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