CloneSig can jointly infer intra-tumor heterogeneity and mutational signature activity in bulk tumor sequencing data
Intratumour heterogeneity (ITH) and mutational signatures are typically analysed separately, even though they are not necessarily independent. Here, the authors present CloneSig, a tool for the joint estimation of ITH and mutational signatures, with which they analyse the TCGA and PCAWG datasets.
Guardado en:
Autores principales: | Judith Abécassis, Fabien Reyal, Jean-Philippe Vert |
---|---|
Formato: | article |
Lenguaje: | EN |
Publicado: |
Nature Portfolio
2021
|
Materias: | |
Acceso en línea: | https://doaj.org/article/9296eac0f7114802a1105cd6046c1b10 |
Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
Ejemplares similares
-
FastClone is a probabilistic tool for deconvoluting tumor heterogeneity in bulk-sequencing samples
por: Yao Xiao, et al.
Publicado: (2020) -
A common methodological phylogenomics framework for intra-patient heteroplasmies to infer SARS-CoV-2 sublineages and tumor clones
por: Filippo Utro, et al.
Publicado: (2021) -
Using sigLASSO to optimize cancer mutation signatures jointly with sampling likelihood
por: Shantao Li, et al.
Publicado: (2020) -
epihet for intra-tumoral epigenetic heterogeneity analysis and visualization
por: Xiaowen Chen, et al.
Publicado: (2021) -
SciClone: inferring clonal architecture and tracking the spatial and temporal patterns of tumor evolution.
por: Christopher A Miller, et al.
Publicado: (2014)